RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 NGLY1Q96IV0 654 aa18.93■□□□□ 0.62
PTPA-223ENST00000452489 CALN1Q9BXU9 219 aa18.93■□□□□ 0.62
PTPA-223ENST00000452489 SLC7A5P2Q9GIP4 190 aa18.93■□□□□ 0.62
PTPA-223ENST00000452489 WARS2Q9UGM6 360 aaKnown RBP18.93■□□□□ 0.62
PTPA-223ENST00000452489 PCSK1NQ9UHG2 260 aa18.93■□□□□ 0.62
PTPA-223ENST00000452489 AURKCQ9UQB9 309 aa18.93■□□□□ 0.62
PTPA-223ENST00000452489 COPG1Q9Y678 874 aaKnown RBP18.93■□□□□ 0.62
PTPA-223ENST00000452489 GAS7O60861 476 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 XYLBO75191 536 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 NAT2P11245 290 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 KRT3P12035 628 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 KRT6CP48668 564 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 TUBA1BP68363 451 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 MMRN1Q13201 1228 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 TUBA1AQ71U36 451 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 SNX31Q8N9S9 440 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 ZNF516Q92618 1163 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 RMDN3Q96TC7 470 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 SATB2Q9UPW6 733 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 UGT2A1Q9Y4X1 527 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 HEATR9A2RTY3 570 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 FAM172BPA6NC97 362 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 H7C0C1 242 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 TRIM24O15164 1050 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 LRCH4O75427 683 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 DDHD2O94830 711 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 MAP3K6O95382 1288 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 SLURP2P0DP57 97 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 HDCP19113 662 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 GRIA1P42261 906 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 ATP5OP48047 213 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 DLG2Q15700 870 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 PAGE2BQ5JRK9 111 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 LRRC8EQ6NSJ5 796 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 ZNF773Q6PK81 442 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 CRTC3Q6UUV7 619 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 CMC1Q7Z7K0 106 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 KIAA0319LQ8IZA0 1049 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 ACMSDQ8TDX5 336 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 SIGLEC10Q96LC7 697 aa18.92■□□□□ 0.62
PTPA-223ENST00000452489 PSMA2P25787 234 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 NAMPTP43490 491 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 GTF2BQ00403 316 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 PICALMQ13492 652 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 PITRM1Q5JRX3 1037 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 INTS11Q5TA45 600 aaKnown RBP18.91■□□□□ 0.62
PTPA-223ENST00000452489 PLD6Q8N2A8 252 aaKnown RBP18.91■□□□□ 0.62
PTPA-223ENST00000452489 KCTD6Q8NC69 237 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 SLC7A3Q8WY07 619 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 FIG4Q92562 907 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 EBNA1BP2Q99848 306 aaKnown RBP18.91■□□□□ 0.62
PTPA-223ENST00000452489 FUNDC2Q9BWH2 189 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 PKD2L2Q9NZM6 624 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 OAZ3Q9UMX2 235 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 FZD1Q9UP38 647 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 ANGPTL3Q9Y5C1 460 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.91■□□□□ 0.62
PTPA-223ENST00000452489 KCNN4O15554 427 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 DYRK3O43781 588 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 KCNK2O95069 426 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 LTFP02788 710 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 VDRP11473 427 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 LIG4P49917 911 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 CYP24A1Q07973 514 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 HERC3Q15034 1050 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 SEL1L3Q68CR1 1132 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 SLC16A12Q6ZSM3 486 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 PACRGLQ8N7B6 248 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 BEND7Q8N7W2 519 aaPredicted RBP18.91■□□□□ 0.62
PTPA-223ENST00000452489 CNTD1Q8N815 330 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 FKBP10Q96AY3 582 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 HDAC11Q96DB2 347 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 DUS3LQ96G46 650 aaKnown RBP18.91■□□□□ 0.62
PTPA-223ENST00000452489 SLC39A3Q9BRY0 314 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 PDZD7Q9H5P4 517 aa18.91■□□□□ 0.62
PTPA-223ENST00000452489 TMEM150BA6NC51 233 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 SPDYE2BA6NHP3 402 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 DDX39AO00148 427 aaKnown RBP18.9■□□□□ 0.62
PTPA-223ENST00000452489 EI24O14681 340 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 HDAC3O15379 428 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 TMCC2O75069 709 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 RFPL2O75678 378 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 F7P08709 466 aaPredicted RBP18.9■□□□□ 0.62
PTPA-223ENST00000452489 SPDYE6P0CI01 402 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 ATP6V1B2P21281 511 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 GARTP22102 1010 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 CCND2P30279 289 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 CASP3P42574 277 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 FSTL1Q12841 308 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 SPDYE2Q495Y8 402 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 RSBN1Q5VWQ0 802 aaPredicted RBP18.9■□□□□ 0.62
PTPA-223ENST00000452489 ZNF534Q76KX8 674 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 SLC4A11Q8NBS3 891 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 TOP1MTQ969P6 601 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 SEZ6LQ9BYH1 1024 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 AASDHPPTQ9NRN7 309 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 TESMINQ9Y4I5 508 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 GRID2O43424 1007 aa18.9■□□□□ 0.62
PTPA-223ENST00000452489 JUNBP17275 347 aaPredicted RBP18.9■□□□□ 0.62
PTPA-223ENST00000452489 DDX5P17844 614 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms