RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 C7P10643 843 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 CSRP1P21291 193 aaKnown RBP17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 SLC8A1P32418 973 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 MAN1A1P33908 653 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 CDH4P55283 916 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 OXCT1P55809 520 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 SULT2A1Q06520 285 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 GRIK2Q13002 908 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 MTA1Q13330 715 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 HADHQ16836 314 aaKnown RBP17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 C5orf22Q49AR2 442 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 ACCSLQ4AC99 568 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 C11orf63Q6NUN7 778 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 FAM131BQ86XD5 332 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 ZNF683Q8IZ20 524 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 BIRC7Q96CA5 298 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 BTBD6Q96KE9 485 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 MUC3BQ9H195 1237 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 NEUROG2Q9H2A3 272 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 MPP6Q9NZW5 540 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 SALL4Q9UJQ4 1053 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 VPS28Q9UK41 221 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 OR51B4Q9Y5P0 310 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 CACNA1EQ15878 2313 aa17.45■□□□□ 0.38
PRPF40A-204ENST00000450303 BUB1BO60566 1050 aaPredicted RBP17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 SRGAP2O75044 1071 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 RNASEH2AO75792 299 aaKnown RBP17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 RHOCP08134 193 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 RDXP35241 583 aaKnown RBP17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 SSR1P43307 286 aaKnown RBP17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 CSNK1EP49674 416 aaKnown RBP17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 OGDHQ02218 1023 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 ZNF252P-AS1Q0IIN9 211 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 SEMA3BQ13214 749 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 CDO1Q16878 200 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 C15orf59Q2T9L4 293 aaPredicted RBP17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 LRRC31Q6UY01 552 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 TFAP2DQ7Z6R9 452 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 C1orf216Q8TAB5 229 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 FRS2Q8WU20 508 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 FAM172AQ8WUF8 416 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 OMDQ99983 421 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 TRIM7Q9C029 511 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 SGK2Q9HBY8 427 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 SLC25A13Q9UJS0 675 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 TBC1D30Q9Y2I9 924 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 DOCK4Q8N1I0 1966 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 PCNX2A6NKB5 2137 aa17.44■□□□□ 0.38
PRPF40A-204ENST00000450303 A0A1B0GVT2 93 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 DRGXA6NNA5 263 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 E9PAM4 449 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 PLK4O00444 970 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 SPOPO43791 374 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 BNIP3LO60238 219 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 SNAP91O60641 907 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 PALMO75781 387 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 ENDOD1O94919 500 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 IL1BP01584 269 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 CEACAM1P13688 526 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 CD59P13987 128 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 PMLP29590 882 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 PCK1P35558 622 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 BNC1Q01954 994 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 USP30Q70CQ3 517 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 BNIPLQ7Z465 357 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 AADATQ8N5Z0 425 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 CENPIQ92674 756 aaPredicted RBP17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 PCED1AQ9H1Q7 454 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 SLC32A1Q9H598 525 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 IL21RQ9HBE5 538 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 AMFRQ9UKV5 643 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 SCML1Q9UN30 329 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 ALG6Q9Y672 507 aa17.43■□□□□ 0.38
PRPF40A-204ENST00000450303 PLXNA2O75051 1894 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 SPAARA0A1B0GVQ0 90 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 GRID2IPA4D2P6 1211 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 MT-CO1P00395 513 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 METAP1P53582 386 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 ETF1P62495 437 aaKnown RBP17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 FOXC1Q12948 553 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 DLG2Q15700 870 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 ARL13BQ3SXY8 428 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 ZNF569Q5MCW4 686 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 ARTNQ5T4W7 220 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 KIAA0895LQ68EN5 471 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 SCYL2Q6P3W7 929 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 NCEH1Q6PIU2 408 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 LAYNQ6UX15 382 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 PEX26Q7Z412 305 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 PIP4P1Q86T03 277 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 C1orf74Q96LT6 269 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 CAMK1GQ96NX5 476 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 PSMB7Q99436 277 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 MAGEB5Q9BZ81 275 aa17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 DNAAF2Q9NVR5 837 aaKnown RBP17.42■□□□□ 0.38
PRPF40A-204ENST00000450303 TMEM131Q92545 1883 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 KNL1Q8NG31 2342 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 A0A0D9SEW6 157 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 PRPSAP2O60256 369 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms