RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 SLC38A7Q9NVC3 462 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 CLIC5Q9NZA1 410 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 HDAC3O15379 428 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 MMP3P08254 477 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 SMPD1P17405 629 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 PMLP29590 882 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 CHN2P52757 468 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 RWDD4Q6NW29 188 aaKnown RBP11.5□□□□□ -0.57
SYVN1-204ENST00000449943 C16orf89Q6UX73 402 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 CLEC20AQ6ZU45 233 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 BHLHE22Q8NFJ8 381 aaPredicted RBP11.5□□□□□ -0.57
SYVN1-204ENST00000449943 NLGN2Q8NFZ4 835 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 ZFAND2BQ8WV99 257 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 ABHD16BQ9H3Z7 469 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 CASS4Q9NQ75 786 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 ZDHHC7Q9NXF8 308 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 APPL1Q9UKG1 709 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 CDYLQ9Y232 598 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 LTBP3Q9NS15 1303 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 MYOCOSA0A1B0GUC4 107 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 TYW5A2RUC4 315 aaKnown RBP11.5□□□□□ -0.57
SYVN1-204ENST00000449943 DFFAO00273 331 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 FCGRTP55899 365 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 CTBP1Q13363 440 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 MAP3K21Q5TCX8 1036 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 GPRIN1Q7Z2K8 1008 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 SPATA22Q8NHS9 363 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 TRIM62Q9BVG3 475 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 RAP2CQ9Y3L5 183 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 MYCP01106 439 aaPredicted RBP11.5□□□□□ -0.57
SYVN1-204ENST00000449943 FAM200BP0CF97 657 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 ATP6V1B1P15313 513 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 GLDCP23378 1020 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 MAGEA12P43365 314 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 INHBEP58166 350 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 LILRA4P59901 499 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 MPP1Q00013 466 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 TLR1Q15399 786 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 GEN1Q17RS7 908 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 ANO4Q32M45 955 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 LIPMQ5VYY2 423 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 SPATA24Q86W54 205 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 PIP4K2CQ8TBX8 421 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 TMEM40Q8WWA1 233 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 NPAS2Q99743 824 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 GBA3Q9H227 469 aa11.5□□□□□ -0.57
SYVN1-204ENST00000449943 RGSL1A5PLK6 1076 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 MATN2O00339 956 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 GIPC1O14908 333 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 TFEBP19484 476 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 PRDX6P30041 224 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.49□□□□□ -0.57
SYVN1-204ENST00000449943 PTAR1Q7Z6K3 402 aaPredicted RBP11.49□□□□□ -0.57
SYVN1-204ENST00000449943 CLEC14AQ86T13 490 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 DENND6AQ8IWF6 608 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 IPMKQ8NFU5 416 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 ZFP42Q96MM3 310 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 HNRNPABQ99729 332 aaKnown RBP11.49□□□□□ -0.57
SYVN1-204ENST00000449943 SIK2Q9H0K1 926 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 GTSE1Q9NYZ3 720 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 XPR1Q9UBH6 696 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 STK39Q9UEW8 545 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 IPO11Q9UI26 975 aaKnown RBP11.49□□□□□ -0.57
SYVN1-204ENST00000449943 PCDHGB4Q9UN71 923 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 PSMD13Q9UNM6 376 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 PCDHGB5Q9Y5G0 923 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 MANSC4A6NHS7 340 aaPredicted RBP11.49□□□□□ -0.57
SYVN1-204ENST00000449943 GPR32O75388 356 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 YBX3P16989 372 aaKnown RBP eCLIP11.49□□□□□ -0.57
SYVN1-204ENST00000449943 PNPLA4P41247 253 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 ITPRIPL1Q6GPH6 555 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 RNF135Q8IUD6 432 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 SCN4BQ8IWT1 228 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 ZSCAN18Q8TBC5 510 aaPredicted RBP11.49□□□□□ -0.57
SYVN1-204ENST00000449943 VAPBO95292 243 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 CTSHP09668 335 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 ARSAP15289 507 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 PPARGP37231 505 aaPredicted RBP11.49□□□□□ -0.57
SYVN1-204ENST00000449943 RPL34P49207 117 aaKnown RBP11.49□□□□□ -0.57
SYVN1-204ENST00000449943 PPIDQ08752 370 aaKnown RBP11.49□□□□□ -0.57
SYVN1-204ENST00000449943 RARS2Q5T160 578 aaKnown RBP11.49□□□□□ -0.57
SYVN1-204ENST00000449943 ALKAL1Q6UXT8 129 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 ZYG11AQ6WRX3 759 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 PAQR9Q6ZVX9 377 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 RHOBTB2Q9BYZ6 727 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 WDR41Q9HAD4 459 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 ADA2Q9NZK5 511 aa11.49□□□□□ -0.57
SYVN1-204ENST00000449943 C17orf102A2RUQ5 167 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 PFDN6O15212 129 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 TRPA1O75762 1119 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 MT-CYBP00156 380 aaPredicted RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 FYNP06241 537 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 DARSP14868 501 aaKnown RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 GK3PQ14409 553 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 IYDQ6PHW0 289 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 FSTL5Q8N475 847 aaPredicted RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 DRC3Q9H069 523 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 TKTL2Q9H0I9 626 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 ATXN3LQ9H3M9 355 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms