RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PSKH2Q96QS6 385 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 HINFPQ9BQA5 517 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 TRPV5Q9NQA5 729 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 UBA2Q9UBT2 640 aaPredicted RBP19.63■□□□□ 0.73
RPS28-202ENST00000449223 SHOC2Q9UQ13 582 aa19.63■□□□□ 0.73
RPS28-202ENST00000449223 CCDC151A5D8V7 595 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 CBX4O00257 560 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 METTL18O95568 372 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 GLDCP23378 1020 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 GDI1P31150 447 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 MMP13P45452 471 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 VASPP50552 380 aaPredicted RBP19.62■□□□□ 0.73
RPS28-202ENST00000449223 SULT2A1Q06520 285 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 KCNJ11Q14654 390 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 FUT11Q495W5 492 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 IZUMO3Q5VZ72 239 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 RETSATQ6NUM9 610 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 PPIL6Q8IXY8 311 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 NAT8LQ8N9F0 302 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 CPT1BQ92523 772 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 PPP1R2P1Q96PQ5 205 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 CEP41Q9BYV8 373 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 EIF2B3Q9NR50 452 aaKnown RBP19.62■□□□□ 0.73
RPS28-202ENST00000449223 RAB6BQ9NRW1 208 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 HAUS2Q9NVX0 235 aa19.62■□□□□ 0.73
RPS28-202ENST00000449223 RBM22Q9NW64 420 aaKnown RBP eCLIP19.62■□□□□ 0.73
RPS28-202ENST00000449223 SNAP91O60641 907 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 TULP3O75386 442 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 HLA-DQB2P05538 268 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 MYBL2P10244 700 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 DGKGP49619 791 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 ITGA8P53708 1063 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 CBLBQ13191 982 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 BRD3Q15059 726 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 ADIPOR2Q86V24 386 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 C12orf40Q86WS4 652 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 ST13P5Q8NFI4 369 aaPredicted RBP19.61■□□□□ 0.73
RPS28-202ENST00000449223 FBXO25Q8TCJ0 367 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 WFIKKN2Q8TEU8 576 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 PPM1EQ8WY54 764 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 IFT81Q8WYA0 676 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 EXOC4Q96A65 974 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 TTC17Q96AE7 1141 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 AGAP3Q96P47 875 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 FCRL5Q96RD9 977 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 GORASP1Q9BQQ3 440 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 ETNK1Q9HBU6 452 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 SEPT3Q9UH03 358 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 FAM50BQ9Y247 325 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 HS3ST2Q9Y278 367 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 TICRRQ7Z2Z1 1910 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 ERI2A8K979 691 aaKnown RBP19.61■□□□□ 0.73
RPS28-202ENST00000449223 TPSB2P20231 275 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 PSMB4P28070 264 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 GJA4P35212 333 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 HSPA9P38646 679 aaKnown RBP19.61■□□□□ 0.73
RPS28-202ENST00000449223 CDK16Q00536 496 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 TPSAB1Q15661 275 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 BBS5Q8N3I7 341 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 PHTF2Q8N3S3 785 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 HNRNPLLQ8WVV9 542 aaKnown RBP19.61■□□□□ 0.73
RPS28-202ENST00000449223 CHFRQ96EP1 664 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 MGME1Q9BQP7 344 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 FOXP3Q9BZS1 431 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 PHACTR1Q9C0D0 580 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 NEUROG2Q9H2A3 272 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 GLOD4Q9HC38 313 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 DNAJC17Q9NVM6 304 aaKnown RBP19.61■□□□□ 0.73
RPS28-202ENST00000449223 GTSE1Q9NYZ3 720 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 RSPH14Q9UHP6 348 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 NFU1Q9UMS0 254 aa19.61■□□□□ 0.73
RPS28-202ENST00000449223 MIA3Q5JRA6 1907 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 H2AFXP16104 143 aaPredicted RBP19.6■□□□□ 0.73
RPS28-202ENST00000449223 NFKB1P19838 968 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 SERPINH1P50454 418 aaKnown RBP19.6■□□□□ 0.73
RPS28-202ENST00000449223 PLTPP55058 493 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 BASP1P80723 227 aaKnown RBP19.6■□□□□ 0.73
RPS28-202ENST00000449223 SLC14A2Q15849 920 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 ITPRIPL2Q3MIP1 535 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 KCTD11Q693B1 232 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 PTCRAQ6ISU1 281 aaPredicted RBP19.6■□□□□ 0.73
RPS28-202ENST00000449223 NAT16Q8N8M0 369 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 PRCCQ92733 491 aaPredicted RBP19.6■□□□□ 0.73
RPS28-202ENST00000449223 TADA1Q96BN2 335 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 SLC25A51Q9H1U9 297 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 BRD9Q9H8M2 597 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 KCNK12Q9HB15 430 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 ANAPC5Q9UJX4 755 aa19.6■□□□□ 0.73
RPS28-202ENST00000449223 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.59■□□□□ 0.73
RPS28-202ENST00000449223 SP100P23497 879 aaPredicted RBP19.59■□□□□ 0.73
RPS28-202ENST00000449223 OPRD1P41143 372 aa19.59■□□□□ 0.73
RPS28-202ENST00000449223 HLTFQ14527 1009 aaKnown RBP eCLIP19.59■□□□□ 0.73
RPS28-202ENST00000449223 ZNF235Q14590 738 aa19.59■□□□□ 0.73
RPS28-202ENST00000449223 EIF4HQ15056 248 aaKnown RBP19.59■□□□□ 0.73
RPS28-202ENST00000449223 TMEM215Q68D42 235 aa19.59■□□□□ 0.73
RPS28-202ENST00000449223 PGBD5Q8N414 524 aa19.59■□□□□ 0.73
RPS28-202ENST00000449223 MCUQ8NE86 351 aa19.59■□□□□ 0.73
RPS28-202ENST00000449223 USP33Q8TEY7 942 aa19.59■□□□□ 0.73
RPS28-202ENST00000449223 AENQ8WTP8 325 aaKnown RBP19.59■□□□□ 0.73
RPS28-202ENST00000449223 IMP4Q96G21 291 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms