RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 MIPP30301 263 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 ETFBP38117 255 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 CSNK1EP49674 416 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 ADPRHP54922 357 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 GRIK2Q13002 908 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 KCNT1Q5JUK3 1230 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 ERMARDQ5T6L9 678 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 C22orf39Q6P5X5 142 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 DBX2Q6ZNG2 339 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 MINDY1Q8N5J2 469 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 ARRDC3Q96B67 414 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 ZNF653Q96CK0 615 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 DNAJC7Q99615 494 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 ZDHHC5Q9C0B5 715 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 TNKS2Q9H2K2 1166 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 KDM4CQ9H3R0 1056 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 GPATCH2LQ9NWQ4 482 aa14.36□□□□□ -0.11
RTFDC1-204ENST00000449062 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.36□□□□□ -0.114e-8■□□□□ 11.3
RTFDC1-204ENST00000449062 LRRC72A6NJI9 287 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 EIF3CLB5ME19 914 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 PLRG1O43660 514 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 RAMP2O60895 175 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 ADRB1P08588 477 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 IL1R2P27930 398 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 HTR7P34969 479 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 PCK1P35558 622 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 HCAR3P49019 387 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 YBEYP58557 167 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 ACAP1Q15027 740 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 POLD3Q15054 466 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 UAP1L1Q3KQV9 507 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 CARD16Q5EG05 197 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 ARSIQ5FYB1 569 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 PIP5KL1Q5T9C9 394 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 N4BP2L1Q5TBK1 243 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 SPECC1LQ69YQ0 1117 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 ALKBH5Q6P6C2 394 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 PSTKQ8IV42 348 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 VSTM4Q8IW00 320 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 PCDH20Q8N6Y1 951 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 OR14C36Q8NHC7 312 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 TRIM11Q96F44 468 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 EIF3CQ99613 913 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 EPAS1Q99814 870 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 GTPBP2Q9BX10 602 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 THAP2Q9H0W7 228 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 LRRC19Q9H756 370 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 MRPL47Q9HD33 250 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 PCSK1NQ9UHG2 260 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 FCF1Q9Y324 198 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 SCINQ9Y6U3 715 aa14.35□□□□□ -0.11
RTFDC1-204ENST00000449062 A0A1B0GVT2 93 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 A0A1W2PR77 199 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 FAM47DPA6NHR8 397 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 RASA4BC9J798 803 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 RASA4O43374 803 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 CREB3O43889 395 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 WNT1P04628 370 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 CEACAM1P13688 526 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 TCF4P15884 667 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 EIF4A3P38919 411 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 GRIA4P48058 902 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 AFF3P51826 1226 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 PPP2CBP62714 309 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 RACK1P63244 317 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 PPP2CAP67775 309 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 SLC14A1Q13336 389 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 SERINC3Q13530 473 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 KIF19Q2TAC6 998 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 HLA-BQ31612 363 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 POM121L1PQ3SYA9 428 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 TDRD12Q587J7 1177 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 AFMIDQ63HM1 303 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 OR8K1Q8NGG5 319 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 ARHGEF26Q96DR7 871 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 KCTD15Q96SI1 283 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 SNRNP25Q9BV90 132 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 HDAC8Q9BY41 377 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 IL21RQ9HBE5 538 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 MYO1AQ9UBC5 1043 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 AP4E1Q9UPM8 1137 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 ANKRD6Q9Y2G4 727 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 ADAMTS9Q9P2N4 1935 aa14.34□□□□□ -0.11
RTFDC1-204ENST00000449062 TBC1D3DA0A087WVF3 549 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 TBC1D3IA0A087WXS9 549 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 TBC1D3EA0A087X179 549 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 TBC1D3KA0A087X1G2 549 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 TBC1D3FA6NER0 549 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 TBC1D3LB9A6J9 549 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 C1QTNF3-AMACRE9PGA6 284 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 FGF10O15520 208 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 CBFA2T2O43439 604 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 BNIP3LO60238 219 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 OPHN1O60890 802 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 LEFTY1O75610 366 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 RNF8O76064 485 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 PRNPP04156 253 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 TBC1D3HP0C7X1 549 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 ZNF883P0CG24 379 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms