RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ARHGAP36Q6ZRI8 547 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 TFAP2DQ7Z6R9 452 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 ZNF354CQ86Y25 554 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 CACNA2D3Q8IZS8 1091 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 C4orf33Q8N1A6 199 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 BBS5Q8N3I7 341 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 ANKS4BQ8N8V4 417 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 DENND1AQ8TEH3 1009 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 CLP1Q92989 425 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 IGSF8Q969P0 613 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 PSMG2Q969U7 264 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 TBL1YQ9BQ87 522 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 GORASP1Q9BQQ3 440 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 IQCGQ9H095 443 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 SLC25A51Q9H1U9 297 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 MAGEH1Q9H213 219 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 RABEP2Q9H5N1 569 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 NOL6Q9H6R4 1146 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 VPS45Q9NRW7 570 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 NDFIP2Q9NV92 336 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 NSMCE4AQ9NXX6 385 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 INSL6Q9Y581 213 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 INSL5Q9Y5Q6 135 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 RPS6KL1Q9Y6S9 549 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 FAM169AQ9Y6X4 670 aa10.76□□□□□ -0.69
VIPAS39-203ENST00000448935 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 COCHO43405 550 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 FGF18O76093 207 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 CNTN5O94779 1100 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 GJB5O95377 273 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 ASMTLO95671 621 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 CTSAP10619 480 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 CDH4P55283 916 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 SLC18A2Q05940 514 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 NIPAL4Q0D2K0 466 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 MPP2Q14168 576 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 ALFQ53S48 1182 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 POTEHQ6S545 545 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 TIFABQ6ZNK6 161 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 CCDC149Q6ZUS6 474 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 OTOP2Q7RTS6 562 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 TMEM135Q86UB9 458 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 HERC6Q8IVU3 1022 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 LGI2Q8N0V4 545 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 TEX26Q8N6G2 289 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 BANPQ8N9N5 519 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 GRAMD1AQ96CP6 724 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 HMCESQ96FZ2 354 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 CERS2Q96G23 380 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 APOPT1Q96IL0 206 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 ZNF599Q96NL3 588 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 FSD1LQ9BXM9 530 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 ZBP1Q9H171 429 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 KIF9Q9HAQ2 790 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 PLAC1Q9HBJ0 212 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 MKS1Q9NXB0 559 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 ZFATQ9P243 1243 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 SOX13Q9UN79 622 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 PTPRSQ13332 1948 aa10.75□□□□□ -0.69
VIPAS39-203ENST00000448935 ATXN2Q99700 1313 aaKnown RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 GOLGA6L7A0A1B0GV03 622 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 CXorf49A8MYA2 514 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 FOXO6A8MYZ6 492 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 TRIM49D1C9J1S8 452 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 COPEO14579 308 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 LPXNO60711 386 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 CLDN11O75508 207 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 OAS1P00973 400 aaKnown RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 HLA-DQB2P05538 268 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 ADH1AP07327 375 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 RPA3P35244 121 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 ETFBP38117 255 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 RGS19P49795 217 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 KCNQ1P51787 676 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 PPARDQ03181 441 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 FPGSQ05932 587 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 SERINC3Q13530 473 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 ANKRD20A4Q4UJ75 823 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 PCID2Q5JVF3 399 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 ADGRF1Q5T601 910 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 NADSYN1Q6IA69 706 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 TRMT10BQ6PF06 316 aaKnown RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 PSRC1Q6PGN9 363 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 DNAJC14Q6Y2X3 702 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 RGS9BPQ6ZS82 235 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 CHST9Q7L1S5 443 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 OTOP3Q7RTS5 596 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 TMCO2Q7Z6W1 182 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 DNAJB7Q7Z6W7 309 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 RASSF3Q86WH2 238 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 LRRC34Q8IZ02 419 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 GABPB2Q8TAK5 448 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 GDAP1Q8TB36 358 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 ACMSDQ8TDX5 336 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 ZNF669Q96BR6 464 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 OXNAD1Q96HP4 312 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 TGS1Q96RS0 853 aaKnown RBP10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 CPNE1Q99829 537 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 PAIP2Q9BPZ3 127 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms