RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 CHSY1Q86X52 802 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 CPNE8Q86YQ8 564 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 PDCD7Q8N8D1 485 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 C3orf20Q8ND61 904 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 MDM1Q8TC05 714 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 ADAM32Q8TC27 787 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 CTNNBL1Q8WYA6 563 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 PTPRN2Q92932 1015 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 VCPIP1Q96JH7 1222 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 BTBD6Q96KE9 485 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 MCEEQ96PE7 176 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 SELENOOQ9BVL4 669 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 NUP85Q9BW27 656 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 KDM4CQ9H3R0 1056 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 TRMT1Q9NXH9 659 aaKnown RBP14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 BAHCC1Q9P281 2608 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 FTSJ1Q9UET6 329 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 PPP2R2CQ9Y2T4 447 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 PCDHGA1Q9Y5H4 931 aa14.11□□□□□ -0.15
PDLIM2-213ENST00000448520 KCNU1A8MYU2 1149 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 C10orf142B7Z368 130 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 F5H5T6 163 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 IGLV3-25P01717 112 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 GLI1P08151 1106 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 CCDC175P0C221 793 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 MYBL1P10243 752 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 TFE3P19532 575 aaPredicted RBP14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 RFC1P35251 1148 aaPredicted RBP14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 NUDT1P36639 197 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 CTSOP43234 321 aaPredicted RBP14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 GSCP56915 257 aaPredicted RBP14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 KRT83P78385 493 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 EIF4EBP2Q13542 120 aaPredicted RBP14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 ELAVL3Q14576 367 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 RAB6CQ53S08 254 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 PPP1R15BQ5SWA1 713 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 RAP1GAP2Q684P5 730 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 PPP1R2P3Q6NXS1 205 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 LAYNQ6UX15 382 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 SLC26A9Q7LBE3 791 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 APCDD1Q8J025 514 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 DEFB106AQ8N104 65 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 STK40Q8N2I9 435 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 OR14C36Q8NHC7 312 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 TRIM11Q96F44 468 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 RPL10LQ96L21 214 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 SLC6A18Q96N87 628 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 RAB6CQ9H0N0 254 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 SCUBE2Q9NQ36 999 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 GDF3Q9NR23 364 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 AASDHPPTQ9NRN7 309 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 CTTNBP2NLQ9P2B4 639 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 SERGEFQ9UGK8 458 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 TMEM59LQ9UK28 342 aa14.1□□□□□ -0.15
PDLIM2-213ENST00000448520 LAMA5O15230 3695 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 SIGLEC16A6NMB1 481 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 TMEM110-MUSTN1A8MSY1 372 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 BUB1O43683 1085 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 MAGEC1O60732 1142 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 DAB1O75553 588 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 IL1BP01584 269 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 ITGAVP06756 1048 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 KRT3P12035 628 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 HOXB3P14651 431 aaPredicted RBP14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 CCR1P32246 355 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 ARRB1P49407 418 aaPredicted RBP14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 SNX16P57768 344 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 CYP4F3Q08477 520 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 EFHC1Q5JVL4 640 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 RABGAP1LQ5R372 815 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 FAM46CQ5VWP2 391 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 C19orf48Q6RUI8 117 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 DSG4Q86SJ6 1040 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 PRPF39Q86UA1 669 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 OXR1Q8N573 874 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 SLC35G2Q8TBE7 412 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 ERVMER34-1Q9H9K5 563 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 EBF2Q9HAK2 575 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 ASNSD1Q9NWL6 643 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 XPO7Q9UIA9 1087 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 INTUQ9ULD6 942 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 PAXBP1Q9Y5B6 917 aa14.09□□□□□ -0.15
PDLIM2-213ENST00000448520 TBC1D3DA0A087WVF3 549 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 TBC1D3IA0A087WXS9 549 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 TBC1D3EA0A087X179 549 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 TBC1D3KA0A087X1G2 549 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 A0A1B0GVM2 712 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 A0A1W2PR77 199 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 MACROD2A1Z1Q3 448 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 TBC1D3FA6NER0 549 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 TCAF2A6NFQ2 919 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 TBC1D3LB9A6J9 549 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 TLR4O00206 839 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 ENC1O14682 589 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 PJA2O43164 708 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 SLC7A4O43246 635 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 HSF2BPO75031 334 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 LDOC1O95751 146 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 WNT1P04628 370 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms