RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	HEATR6	Q6AI08	1181 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PMF1	Q6P1K2	205 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TAF2	Q6P1X5	1199 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	C1orf228	Q6PIY5	440 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	ALKAL1	Q6UXT8	129 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	CYS1	Q717R9	158 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	LIMS2	Q7Z4I7	341 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	RSPH3	Q86UC2	560 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZC3H18	Q86VM9	953 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SLC26A11	Q86WA9	606 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TTC30A	Q86WT1	665 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	CHSY1	Q86X52	802 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	ADGRF2	Q8IZF7	708 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	FUK	Q8N0W3	1084 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	C4orf33	Q8N1A6	199 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	VPS52	Q8N1B4	723 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SIX6OS1	Q8N1H7	587 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TMEM86A	Q8N2M4	240 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PQLC3	Q8N755	202 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	DCAKD	Q8WVC6	231 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TFB1M	Q8WVM0	346 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SLC44A1	Q8WWI5	657 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	LINC01599	Q8WXQ3	324 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	CENPI	Q92674	756 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	KAT2B	Q92831	832 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	KLHL29	Q96CT2	875 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	APOPT1	Q96IL0	206 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	QKI	Q96PU8	341 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	HNRNPAB	Q99729	332 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	MRPL45	Q9BRJ2	306 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TACO1	Q9BSH4	297 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SYT17	Q9BSW7	474 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	NAT9	Q9BTE0	207 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SNRNP25	Q9BV90	132 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TRIM62	Q9BVG3	475 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	APOL6	Q9BWW8	343 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	VPS11	Q9H270	941 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	DHX35	Q9H5Z1	703 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	NRDE2	Q9H7Z3	1164 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	ECT2	Q9H8V3	914 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	USP29	Q9HBJ7	922 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	FAM49B	Q9NUQ9	324 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SETD4	Q9NVD3	440 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	ETNK2	Q9NVF9	386 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TMEM51	Q9NW97	253 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	MKS1	Q9NXB0	559 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SAE1	Q9UBE0	346 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PRKAG3	Q9UGI9	489 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TUBGCP4	Q9UGJ1	667 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	MBD1	Q9UIS9	605 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZNF180	Q9UJW8	692 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PHTF1	Q9UMS5	762 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	CHMP2B	Q9UQN3	213 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PIN4	Q9Y237	131 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	GINS2	Q9Y248	185 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	HEY1	Q9Y5J3	304 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TEX264	Q9Y6I9	313 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	ANK1	P16157	1881 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	RALGAPA2	Q2PPJ7	1873 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PLXNA1	Q9UIW2	1896 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995		A0A1W2PPM1	405 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	TCRBV9S1A1T	A0A576	114 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	OR14I1	A6ND48	311 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	MANSC4	A6NHS7	340 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	KBTBD13	C9JR72	458 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995		I3L4J1	428 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	HRK	O00198	91 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	AP3B1	O00203	1094 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	HAS3	O00219	553 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	COPE	O14579	308 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	KLF11	O14901	512 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	NCAM2	O15394	837 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	MTSS1	O43312	755 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	MGRN1	O60291	552 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	LPXN	O60711	386 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	OPHN1	O60890	802 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	TGDS	O95455	350 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	F9	P00740	461 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	APOE	P02649	317 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	ATP5B	P06576	529 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	MYL3	P08590	195 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	LCP1	P13796	627 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	EZR	P15311	586 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	KRT4	P19013	534 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	IL4R	P24394	825 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	PRKCH	P24723	683 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	RBL1	P28749	1068 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	ADORA2B	P29275	332 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	SSTR1	P30872	391 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	L1CAM	P32004	1257 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	FOXN2	P32314	431 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	RPA3	P35244	121 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	RGS2	P41220	211 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	LHX1	P48742	406 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	SULT1E1	P49888	294 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	NEK3	P51956	506 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	HDAC4	P56524	1084 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	NCALD	P61601	193 aa		4.16	□□□□□ -1.74
PTPN12-208	ENST00000447995	ELF3	P78545	371 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms