RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 CLEC4CQ8WTT0 213 aa11.65□□□□□ -0.54
GNE-203ENST00000447283 TRIM43Q96BQ3 446 aaPredicted RBP11.65□□□□□ -0.54
GNE-203ENST00000447283 CERS2Q96G23 380 aa11.65□□□□□ -0.54
GNE-203ENST00000447283 P2RY11Q96G91 374 aa11.65□□□□□ -0.54
GNE-203ENST00000447283 SHCBP1LQ9BZQ2 653 aa11.65□□□□□ -0.54
GNE-203ENST00000447283 EPB41L1Q9H4G0 881 aa11.65□□□□□ -0.54
GNE-203ENST00000447283 COG4Q9H9E3 785 aa11.65□□□□□ -0.54
GNE-203ENST00000447283 FZD10Q9ULW2 581 aa11.65□□□□□ -0.54
GNE-203ENST00000447283 LOC100653049A0A140TA62 436 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.64□□□□□ -0.55
GNE-203ENST00000447283 CASTOR2A6NHX0 329 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 F5H423 210 aaPredicted RBP11.64□□□□□ -0.55
GNE-203ENST00000447283 MFSD11O43934 449 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 HUS1O60921 280 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 KRT34O76011 436 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 ERVK-10P10266 1014 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 SERPINB8P50452 374 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 RPS6KA3P51812 740 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 SH3BGRP55822 239 aaPredicted RBP11.64□□□□□ -0.55
GNE-203ENST00000447283 BST2Q10589 180 aaKnown RBP11.64□□□□□ -0.55
GNE-203ENST00000447283 UPP1Q16831 310 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 MMEL1Q495T6 779 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 CLLU1OSQ5K130 101 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 TCHHL1Q5QJ38 904 aaPredicted RBP11.64□□□□□ -0.55
GNE-203ENST00000447283 CNKSR3Q6P9H4 555 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 UBE2Q1Q7Z7E8 422 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 ABI1Q8IZP0 508 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 PYROXD2Q8N2H3 581 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 DCLK2Q8N568 766 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 RBBP8Q99708 897 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 FERMT1Q9BQL6 677 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 IGSF9Q9P2J2 1179 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 SMIM31A0A1B0GVY4 71 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 H2AFYO75367 372 aaKnown RBP11.64□□□□□ -0.55
GNE-203ENST00000447283 GLDCP23378 1020 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 ITGB8P26012 769 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 PSMB4P28070 264 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 SPRP35270 261 aaPredicted RBP11.64□□□□□ -0.55
GNE-203ENST00000447283 GRIA2P42262 883 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 CHN2P52757 468 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 LIMK2P53671 638 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 BCAT1P54687 386 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 USP4Q13107 963 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 LSAMPQ13449 338 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 PDK3Q15120 406 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 UGT2A3Q6UWM9 527 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 CLEC14AQ86T13 490 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 TMEM199Q8N511 208 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 ZNF781Q8N8C0 355 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 ANKRD52Q8NB46 1076 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 ICA1LQ8NDH6 482 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 APPL2Q8NEU8 664 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 UROC1Q96N76 676 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 ZNF358Q9NW07 568 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 PIH1D1Q9NWS0 290 aaKnown RBP11.64□□□□□ -0.55
GNE-203ENST00000447283 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.64□□□□□ -0.55
GNE-203ENST00000447283 NDUFA13Q9P0J0 144 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 C6orf203Q9P0P8 240 aaPredicted RBP11.64□□□□□ -0.55
GNE-203ENST00000447283 STK39Q9UEW8 545 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 PRPF19Q9UMS4 504 aaKnown RBP11.64□□□□□ -0.55
GNE-203ENST00000447283 PSMD13Q9UNM6 376 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 RPS6KL1Q9Y6S9 549 aa11.64□□□□□ -0.55
GNE-203ENST00000447283 G3V2L1 256 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 HOXA2O43364 376 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 B3GAT3O94766 335 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 HSPA4LO95757 839 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 ACADSBP45954 432 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 PEX6Q13608 980 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 PDK1Q15118 436 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 SLC9B1Q4ZJI4 515 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 NAPRTQ6XQN6 538 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 CMC1Q7Z7K0 106 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 TMEM126BQ8IUX1 230 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 CRIPAKQ8N1N5 446 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 PLD6Q8N2A8 252 aaKnown RBP11.63□□□□□ -0.55
GNE-203ENST00000447283 SLC7A14Q8TBB6 771 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 MAPK15Q8TD08 544 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 NAT14Q8WUY8 206 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 SREK1Q8WXA9 508 aaKnown RBP11.63□□□□□ -0.55
GNE-203ENST00000447283 CNDP1Q96KN2 507 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 FCRL3Q96P31 734 aaPredicted RBP11.63□□□□□ -0.55
GNE-203ENST00000447283 PAAF1Q9BRP4 392 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 OXCT2Q9BYC2 517 aaPredicted RBP11.63□□□□□ -0.55
GNE-203ENST00000447283 LRRC40Q9H9A6 602 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 CACNG4Q9UBN1 327 aa11.63□□□□□ -0.55
GNE-203ENST00000447283 E9PBE3 544 aa11.62□□□□□ -0.55
GNE-203ENST00000447283 DENRO43583 198 aaKnown RBP11.62□□□□□ -0.55
GNE-203ENST00000447283 KLHL41O60662 606 aa11.62□□□□□ -0.55
GNE-203ENST00000447283 ZNF189O75820 626 aaPredicted RBP11.62□□□□□ -0.55
GNE-203ENST00000447283 ZMPSTE24O75844 475 aa11.62□□□□□ -0.55
GNE-203ENST00000447283 MPOP05164 745 aa11.62□□□□□ -0.55
GNE-203ENST00000447283 FAM163BP0C2L3 166 aa11.62□□□□□ -0.55
GNE-203ENST00000447283 THRAP10827 490 aa11.62□□□□□ -0.55
GNE-203ENST00000447283 CSF2RAP15509 400 aa11.62□□□□□ -0.55
GNE-203ENST00000447283 PAX3P23760 479 aa11.62□□□□□ -0.55
GNE-203ENST00000447283 GNL1P36915 607 aaPredicted RBP11.62□□□□□ -0.55
GNE-203ENST00000447283 GMPRP36959 345 aa11.62□□□□□ -0.55
GNE-203ENST00000447283 MATKP42679 507 aa11.62□□□□□ -0.55
GNE-203ENST00000447283 ALDH1A3P47895 512 aa11.62□□□□□ -0.55
GNE-203ENST00000447283 CLCN2P51788 898 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms