RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PCID2Q5JVF3 399 aa17.73■□□□□ 0.43
SMC6-206ENST00000446852 C16orf46Q6P387 395 aa17.73■□□□□ 0.43
SMC6-206ENST00000446852 KDELC1Q6UW63 502 aa17.73■□□□□ 0.43
SMC6-206ENST00000446852 RANBP10Q6VN20 620 aa17.73■□□□□ 0.43
SMC6-206ENST00000446852 ZNF512Q96ME7 567 aaPredicted RBP17.73■□□□□ 0.43
SMC6-206ENST00000446852 FSD1LQ9BXM9 530 aa17.73■□□□□ 0.43
SMC6-206ENST00000446852 SLC25A51Q9H1U9 297 aa17.73■□□□□ 0.43
SMC6-206ENST00000446852 SP110Q9HB58 689 aa17.73■□□□□ 0.43
SMC6-206ENST00000446852 IARS2Q9NSE4 1012 aaKnown RBP17.73■□□□□ 0.43
SMC6-206ENST00000446852 TMEM39AQ9NV64 488 aa17.73■□□□□ 0.43
SMC6-206ENST00000446852 AFF4Q9UHB7 1163 aaKnown RBP17.73■□□□□ 0.43
SMC6-206ENST00000446852 HBS1LQ9Y450 684 aaKnown RBP17.73■□□□□ 0.43
SMC6-206ENST00000446852 CCDC195A0A1B0GUA6 201 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 H0YHG0 523 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 SLC6A4P31645 630 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 ATP5C1P36542 298 aaKnown RBP17.72■□□□□ 0.43
SMC6-206ENST00000446852 NUMBP49757 651 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 BNIP1Q12981 228 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 FBXW10Q5XX13 1052 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 FSTL4Q6MZW2 842 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 PKN3Q6P5Z2 889 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 GBP7Q8N8V2 638 aaPredicted RBP17.72■□□□□ 0.43
SMC6-206ENST00000446852 TOP1MTQ969P6 601 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 ISL2Q96A47 359 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 IMP4Q96G21 291 aaKnown RBP17.72■□□□□ 0.43
SMC6-206ENST00000446852 PPP1R2P1Q96PQ5 205 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 ENTPD7Q9NQZ7 604 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 SNX15Q9NRS6 342 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 DONSONQ9NYP3 566 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 DCTN4Q9UJW0 460 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 DNMT3LQ9UJW3 386 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 PTPRSQ13332 1948 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 ZNF840PA6NDX5 716 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 RAMP2O60895 175 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 DNAJC8O75937 253 aaPredicted RBP17.72■□□□□ 0.43
SMC6-206ENST00000446852 ABLIM3O94929 683 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 SOD2P04179 222 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 BPGMP07738 259 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 SPRP35270 261 aaPredicted RBP17.72■□□□□ 0.43
SMC6-206ENST00000446852 MAGEA12P43365 314 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 KPNA1P52294 538 aaPredicted RBP17.72■□□□□ 0.43
SMC6-206ENST00000446852 WNT3AP56704 352 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 IRX4P78413 519 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 DEFB103AP81534 67 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 CCDC15Q0P6D6 951 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 POLD3Q15054 466 aaPredicted RBP17.72■□□□□ 0.43
SMC6-206ENST00000446852 PCSK7Q16549 785 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 SPOUT1Q5T280 376 aaKnown RBP17.72■□□□□ 0.43
SMC6-206ENST00000446852 N4BP2L1Q5TBK1 243 aaPredicted RBP17.72■□□□□ 0.43
SMC6-206ENST00000446852 MARC1Q5VT66 337 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 RFWD3Q6PCD5 774 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 ZNF354CQ86Y25 554 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 CFAP52Q8N1V2 620 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 ZNF461Q8TAF7 563 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 CEP295NLQ96MC4 621 aa17.72■□□□□ 0.43
SMC6-206ENST00000446852 PLXNA4Q9HCM2 1894 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 E2F8A0AVK6 867 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 GLRA3O75311 464 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 IL1BP01584 269 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 PRKCGP05129 697 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 MMP2P08253 660 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 TROVE2P10155 538 aaKnown RBP eCLIP17.71■□□□□ 0.43
SMC6-206ENST00000446852 TYK2P29597 1187 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 OR1E1P30953 314 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 ACVRL1P37023 503 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 BST1Q10588 318 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 MPP3Q13368 585 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 SERINC3Q13530 473 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 CHI3L2Q15782 390 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 STXBP5Q5T5C0 1151 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 SNX30Q5VWJ9 437 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 KYAT3Q6YP21 454 aaKnown RBP17.71■□□□□ 0.43
SMC6-206ENST00000446852 NUDCD3Q8IVD9 361 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 LGI2Q8N0V4 545 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 ACVR1CQ8NER5 493 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 ATP2A3Q93084 1043 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 ZNF689Q96CS4 500 aaPredicted RBP17.71■□□□□ 0.43
SMC6-206ENST00000446852 BEGAINQ9BUH8 593 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 MYLK2Q9H1R3 596 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 RC3H2Q9HBD1 1191 aaKnown RBP17.71■□□□□ 0.43
SMC6-206ENST00000446852 MTO1Q9Y2Z2 717 aaKnown RBP17.71■□□□□ 0.43
SMC6-206ENST00000446852 OBSL1O75147 1896 aa17.71■□□□□ 0.43
SMC6-206ENST00000446852 TTC24A2A3L6 582 aaPredicted RBP17.71■□□□□ 0.42
SMC6-206ENST00000446852 COCHO43405 550 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 ITGB8P26012 769 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 CD86P42081 329 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 NCALDP61601 193 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 DSC2Q02487 901 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 PARP15Q460N3 678 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 ACBD5Q5T8D3 534 aaPredicted RBP17.71■□□□□ 0.42
SMC6-206ENST00000446852 PDPK2PQ6A1A2 396 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 CCDC117Q8IWD4 279 aaPredicted RBP17.71■□□□□ 0.42
SMC6-206ENST00000446852 SLC39A11Q8N1S5 342 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 PGBD5Q8N414 524 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 TEX26Q8N6G2 289 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 E2F7Q96AV8 911 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 CDK5RAP1Q96SZ6 601 aaKnown RBP17.71■□□□□ 0.42
SMC6-206ENST00000446852 ZNF395Q9H8N7 513 aaPredicted RBP17.71■□□□□ 0.42
SMC6-206ENST00000446852 CAB39LQ9H9S4 337 aa17.71■□□□□ 0.42
SMC6-206ENST00000446852 SLC2A6Q9UGQ3 507 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms