RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 SH2D4BQ5SQS7 431 aa14.45□□□□□ -0.1
ERCC3-203ENST00000445889 TMEM135Q86UB9 458 aa14.45□□□□□ -0.1
ERCC3-203ENST00000445889 LCA5Q86VQ0 697 aa14.45□□□□□ -0.1
ERCC3-203ENST00000445889 PDCD6IPQ8WUM4 868 aaKnown RBP14.45□□□□□ -0.1
ERCC3-203ENST00000445889 OSMRQ99650 979 aa14.45□□□□□ -0.1
ERCC3-203ENST00000445889 SNX25Q9H3E2 840 aa14.45□□□□□ -0.1
ERCC3-203ENST00000445889 COQ10BQ9H8M1 238 aa14.45□□□□□ -0.1
ERCC3-203ENST00000445889 TNFRSF12AQ9NP84 129 aa14.45□□□□□ -0.1
ERCC3-203ENST00000445889 SETD4Q9NVD3 440 aa14.45□□□□□ -0.1
ERCC3-203ENST00000445889 NDUFA13Q9P0J0 144 aa14.45□□□□□ -0.1
ERCC3-203ENST00000445889 AURKAO14965 403 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 AP1G1O43747 822 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 FOXD2O60548 495 aaPredicted RBP14.44□□□□□ -0.1
ERCC3-203ENST00000445889 TMCC1O94876 653 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 ME2P23368 584 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 HOXA11P31270 313 aaPredicted RBP14.44□□□□□ -0.1
ERCC3-203ENST00000445889 GALK1P51570 392 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 TMED1Q13445 227 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 C9orf57Q5W0N0 161 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 CAAP1Q9H8G2 361 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 TMCO1Q9UM00 188 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.44□□□□□ -0.1
ERCC3-203ENST00000445889 CNMDO75829 334 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 RECQL4O94761 1208 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 VAPBO95292 243 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 CKMT2P17540 419 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 HMGB2P26583 209 aaKnown RBP14.44□□□□□ -0.1
ERCC3-203ENST00000445889 PPARGP37231 505 aaPredicted RBP14.44□□□□□ -0.1
ERCC3-203ENST00000445889 ETFBP38117 255 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 ADCYAP1R1P41586 468 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 ARHGAP36Q6ZRI8 547 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 CLEC14AQ86T13 490 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 MFSD6LQ8IWD5 586 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 OR9I1Q8NGQ6 314 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 SLC29A1Q99808 456 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 CIB1Q99828 191 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 RBPJLQ9UBG7 517 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 SLC2A6Q9UGQ3 507 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 CDYLQ9Y232 598 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 RAP2CQ9Y3L5 183 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 SNX13Q9Y5W8 968 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 MCM3APO60318 1980 aa14.44□□□□□ -0.1
ERCC3-203ENST00000445889 PARP14Q460N5 1801 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 TCAF2A6NFQ2 919 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 HACD1B0YJ81 288 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 E7ENX8 843 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 PLOD2O00469 737 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 SLC5A2P31639 672 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 GLUD2P49448 558 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 PRAMEP78395 509 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 SOX4Q06945 474 aaPredicted RBP14.43□□□□□ -0.1
ERCC3-203ENST00000445889 CATSPER4Q7RTX7 472 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 RP9Q8TA86 221 aaKnown RBP14.43□□□□□ -0.1
ERCC3-203ENST00000445889 SNRNP27Q8WVK2 155 aaKnown RBP14.43□□□□□ -0.1
ERCC3-203ENST00000445889 SLC45A3Q96JT2 553 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 DRC3Q9H069 523 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 IL1RL2Q9HB29 575 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 CHST12Q9NRB3 414 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 RAB26Q9ULW5 256 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 MTF2Q9Y483 593 aaPredicted RBP14.43□□□□□ -0.1
ERCC3-203ENST00000445889 ZNF638Q14966 1978 aaKnown RBP14.43□□□□□ -0.1
ERCC3-203ENST00000445889 AP2A1O95782 977 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 CDK4P11802 303 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 PRDX6P30041 224 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 PTK2BQ14289 1009 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 LIPMQ5VYY2 423 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 CENPLQ8N0S6 344 aaPredicted RBP14.43□□□□□ -0.1
ERCC3-203ENST00000445889 DIS3LQ8TF46 1054 aaKnown RBP14.43□□□□□ -0.1
ERCC3-203ENST00000445889 SREK1Q8WXA9 508 aaKnown RBP14.43□□□□□ -0.1
ERCC3-203ENST00000445889 NAT9Q9BTE0 207 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 MRPS26Q9BYN8 205 aaKnown RBP14.43□□□□□ -0.1
ERCC3-203ENST00000445889 TRIM8Q9BZR9 551 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 TRPV6Q9H1D0 765 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 LRRC4Q9HBW1 653 aa14.43□□□□□ -0.1
ERCC3-203ENST00000445889 YJEFN3A6XGL0 299 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 SLC35E2BP0CK96 405 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 TPI1P60174 286 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 HPCAP84074 193 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 TTLL4Q14679 1199 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 MTX3Q5HYI7 312 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 NOMO2Q5JPE7 1267 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 FBXO47Q5MNV8 452 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 METTL21CQ5VZV1 264 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 ZBTB46Q86UZ6 589 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 OSTM1Q86WC4 334 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 EXOC8Q8IYI6 725 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 TRIML2Q8N7C3 387 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 PHF21BQ96EK2 531 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 RPL10LQ96L21 214 aaKnown RBP14.42□□□□□ -0.1
ERCC3-203ENST00000445889 MED10Q9BTT4 135 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 RBM38Q9H0Z9 239 aaKnown RBP14.42□□□□□ -0.1
ERCC3-203ENST00000445889 EPB41L1Q9H4G0 881 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 EFCAB1Q9HAE3 211 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 SPON1Q9HCB6 807 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 TRPC7Q9HCX4 862 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 SFMBT1Q9UHJ3 866 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 PRPF19Q9UMS4 504 aaKnown RBP14.42□□□□□ -0.1
ERCC3-203ENST00000445889 ADM5C9JUS6 153 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 NCAM1P13591 858 aa14.42□□□□□ -0.1
ERCC3-203ENST00000445889 KCNA5P22460 613 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms