RNA–Protein interactions for RNA: ENST00000445506.6

MSR1-205, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 1,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-205ENST00000445506 PDE1BQ01064 536 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 BNIP1Q12981 228 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 RAB33AQ14088 237 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 CCDC153Q494R4 210 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 HECTD3Q5T447 861 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 CERCAMQ5T4B2 595 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 DENND5AQ6IQ26 1287 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 KIAA1841Q6NSI8 718 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 PRSS55Q6UWB4 352 aaPredicted RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.78□□□□□ -0.36
MSR1-205ENST00000445506 FAM47EQ6ZV65 393 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 KCNMB4Q86W47 210 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 TMEM173Q86WV6 379 aaPredicted RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 C10orf67Q8IYJ2 551 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 SLC39A11Q8N1S5 342 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 C10orf82Q8WW14 230 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 B3GALT6Q96L58 329 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 DDX50Q9BQ39 737 aaKnown RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 SIKE1Q9BRV8 207 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 TRIM55Q9BYV6 548 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 PPP1R12CQ9BZL4 782 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 MAGEH1Q9H213 219 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 RC3H2Q9HBD1 1191 aaKnown RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 UXTQ9UBK9 157 aaPredicted RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 MID2Q9UJV3 735 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 F5H423 210 aaPredicted RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 ATP9BO43861 1147 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 RAMP2O60895 175 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 USP12O75317 370 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 ALDOAP04075 364 aaKnown RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 CLTBP09497 229 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 HARS2P49590 506 aaKnown RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 LIG3P49916 1009 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 ATN1P54259 1190 aaPredicted RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 CDH4P55283 916 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 SERINC3Q13530 473 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 BMPR2Q13873 1038 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 POLD3Q15054 466 aaPredicted RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 RABGAP1LQ5R372 815 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 FAM182AQ5T1J6 154 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 RAP1GAP2Q684P5 730 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 KIAA0930Q6ICG6 404 aaPredicted RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 KDELC1Q6UW63 502 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 CDHR3Q6ZTQ4 885 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 NLRP9Q7RTR0 991 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 DEFB128Q7Z7B8 93 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 GALNT7Q86SF2 657 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 DDX53Q86TM3 631 aaKnown RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 LMNTD2Q8IXW0 634 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 MICALL1Q8N3F8 863 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 BBS5Q8N3I7 341 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 USP33Q8TEY7 942 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 PEX13Q92968 403 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 IGSF8Q969P0 613 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 E2F7Q96AV8 911 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 TMEM169Q96HH4 297 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 MRGPRX2Q96LB1 330 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 RPRD1AQ96P16 312 aaPredicted RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 TRIM56Q9BRZ2 755 aaKnown RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 TUBB6Q9BUF5 446 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 SP110Q9HB58 689 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.78□□□□□ -0.36
MSR1-205ENST00000445506 TMEM39AQ9NV64 488 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 TRPM5Q9NZQ8 1165 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 SSX2IPQ9Y2D8 614 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 ANKRD6Q9Y2G4 727 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 MTO1Q9Y2Z2 717 aaKnown RBP12.78□□□□□ -0.36
MSR1-205ENST00000445506 TCAF1Q9Y4C2 921 aa12.78□□□□□ -0.36
MSR1-205ENST00000445506 COL4A6Q14031 1691 aa12.77□□□□□ -0.36
MSR1-205ENST00000445506 HEATR9A2RTY3 570 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 ZNF840PA6NDX5 716 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 HNRNPCL1O60812 293 aaKnown RBP12.77□□□□□ -0.37
MSR1-205ENST00000445506 TBX18O95935 607 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 EPOP01588 193 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 ERVK-10P10266 1014 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 NEFHP12036 1026 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 COL6A2P12110 1019 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 HMGA1P17096 107 aaKnown RBP12.77□□□□□ -0.37
MSR1-205ENST00000445506 CES1P23141 567 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 TYK2P29597 1187 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 ALDH1A3P47895 512 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 RFTN1Q14699 578 aaPredicted RBP12.77□□□□□ -0.37
MSR1-205ENST00000445506 VEPH1Q14D04 833 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 ALFQ53S48 1182 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 ALG1LQ6GMV1 187 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 KIAA0408Q6ZU52 694 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 CHST9Q7L1S5 443 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 CCDC91Q7Z6B0 441 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 STRA8Q7Z7C7 330 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 MIB1Q86YT6 1006 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 NUDCD3Q8IVD9 361 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 GIPC2Q8TF65 315 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 SPOCK2Q92563 424 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 HMCESQ96FZ2 354 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 FICDQ9BVA6 458 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 VN1R3Q9BXE9 311 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 FSD1LQ9BXM9 530 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 FAM96AQ9H5X1 160 aa12.77□□□□□ -0.37
MSR1-205ENST00000445506 SLCO1B3Q9NPD5 702 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms