RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 GDF9O60383 454 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 TUBB4AP04350 444 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 ETFBP38117 255 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 GRSF1Q12849 480 aaKnown RBP eCLIP17.57■□□□□ 0.46e-6■■■■□ 20.5
LIME1-202ENST00000444951 SERINC3Q13530 473 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 TMEM215Q68D42 235 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 ZNF783Q6ZMS7 281 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 NUDT18Q6ZVK8 323 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 ACTL9Q8TC94 416 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 WFIKKN2Q8TEU8 576 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 C1orf54Q8WWF1 131 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 ALG14Q96F25 216 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 RPL10LQ96L21 214 aaKnown RBP17.57■□□□□ 0.4
LIME1-202ENST00000444951 C2orf49Q9BVC5 232 aaPredicted RBP17.57■□□□□ 0.4
LIME1-202ENST00000444951 AP1M1Q9BXS5 423 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 SP110Q9HB58 689 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 ZDHHC4Q9NPG8 344 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 VPS51Q9UID3 782 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 ACTL7AQ9Y615 435 aa17.57■□□□□ 0.4
LIME1-202ENST00000444951 H7C0C1 242 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 J3KR12 359 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 APOC4-APOC2K7ER74 178 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 ZNF500O60304 480 aaPredicted RBP17.56■□□□□ 0.4
LIME1-202ENST00000444951 APOC2P02655 101 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 PRLRP16471 622 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 CNR2P34972 360 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 ATP5OP48047 213 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 NR2C2P49116 596 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 GALNT2Q10471 571 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 AP1B1Q10567 949 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 KLF1Q13351 362 aaPredicted RBP17.56■□□□□ 0.4
LIME1-202ENST00000444951 SNX1Q13596 522 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 DMC1Q14565 340 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 CCDC6Q16204 474 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 DNTTIP2Q5QJE6 756 aaKnown RBP17.56■□□□□ 0.4
LIME1-202ENST00000444951 EMC10Q5UCC4 262 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 PRR23CQ6ZRP0 262 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 CEP68Q76N32 757 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 KIAA0907Q7Z7F0 614 aaPredicted RBP17.56■□□□□ 0.4
LIME1-202ENST00000444951 RASGEF1CQ8N431 466 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 KIF18AQ8NI77 898 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 ATG4AQ8WYN0 398 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 HHIPQ96QV1 700 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 LGMNQ99538 433 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 ACE2Q9BYF1 805 aaPredicted RBP17.56■□□□□ 0.4
LIME1-202ENST00000444951 C10orf88Q9H8K7 445 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 ELOVL2Q9NXB9 296 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 SEPT10Q9P0V9 454 aa17.56■□□□□ 0.4
LIME1-202ENST00000444951 IPO11Q9UI26 975 aaKnown RBP17.56■□□□□ 0.4
LIME1-202ENST00000444951 NYNRINQ9P2P1 1898 aaKnown RBP17.55■□□□□ 0.4
LIME1-202ENST00000444951 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.55■□□□□ 0.4
LIME1-202ENST00000444951 CES2O00748 559 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 KDELR3O43731 214 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 MX2P20592 715 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 GARSP41250 739 aaKnown RBP17.55■□□□□ 0.4
LIME1-202ENST00000444951 STK19P49842 368 aaPredicted RBP17.55■□□□□ 0.4
LIME1-202ENST00000444951 PLK1P53350 603 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 EIF3EP60228 445 aaKnown RBP17.55■□□□□ 0.4
LIME1-202ENST00000444951 ECT2LQ008S8 904 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 PDK1Q15118 436 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 NOMO1Q15155 1222 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 FAM182AQ5T1J6 154 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 KBTBD6Q86V97 674 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 DCAF4L2Q8NA75 395 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 MAIP1Q8WWC4 291 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 RTKNQ9BST9 563 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 SLC25A13Q9UJS0 675 aa17.55■□□□□ 0.4
LIME1-202ENST00000444951 CNOT1A5YKK6 2376 aaKnown RBP17.54■□□□□ 0.4
LIME1-202ENST00000444951 K7EQS6 105 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 KRIT1O00522 736 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 PPP1R12AO14974 1030 aaPredicted RBP17.54■□□□□ 0.4
LIME1-202ENST00000444951 MCF2LO15068 1137 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 AXIN1O15169 862 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 LRP3O75074 770 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 ATP5BP06576 529 aaKnown RBP17.54■□□□□ 0.4
LIME1-202ENST00000444951 DRD1P21728 446 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 TIE1P35590 1138 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 PAFAH1B1P43034 410 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 CSRP2Q16527 193 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 FNDC3BQ53EP0 1204 aaKnown RBP17.54■□□□□ 0.4
LIME1-202ENST00000444951 C2orf27AQ580R0 203 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 DARS2Q6PI48 645 aaKnown RBP17.54■□□□□ 0.4
LIME1-202ENST00000444951 BZW1Q7L1Q6 419 aaKnown RBP17.54■□□□□ 0.4
LIME1-202ENST00000444951 CREG2Q8IUH2 290 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 TTC13Q8NBP0 860 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 RPLP0P6Q8NHW5 317 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 ACTRT1Q8TDG2 376 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 USP33Q8TEY7 942 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 UCMAQ8WVF2 138 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 GAB3Q8WWW8 586 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 TTC17Q96AE7 1141 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 ERLEC1Q96DZ1 483 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 OLFM3Q96PB7 478 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 NAP1L3Q99457 506 aaPredicted RBP17.54■□□□□ 0.4
LIME1-202ENST00000444951 SLC8A2Q9UPR5 921 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 ERVW-1Q9UQF0 538 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 RAD54BQ9Y620 910 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 NUP205Q92621 2012 aa17.54■□□□□ 0.4
LIME1-202ENST00000444951 K7ERQ8 282 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 SLC30A4O14863 429 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms