RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 GRK3P35626 688 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 SOX11P35716 441 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 CSE1LP55060 971 aaKnown RBP5.09□□□□□ -1.59
HERC1-201ENST00000443617 MERTKQ12866 999 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 OR7A2PQ8NGA2 310 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 GIPC2Q8TF65 315 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 RANBP9Q96S59 729 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 DIP2AQ14689 1571 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 CACNA1CQ13936 2221 aa5.09□□□□□ -1.59
HERC1-201ENST00000443617 TOR1BO14657 336 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 KATNA1O75449 491 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 CCNKO75909 580 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 RAB44Q7Z6P3 723 aaPredicted RBP5.09□□□□□ -1.6
HERC1-201ENST00000443617 ERO1BQ86YB8 467 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 TBCBQ99426 244 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 ZBTB26Q9HCK0 441 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 POU2F3Q9UKI9 436 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 FAM208AQ9UK61 1670 aaKnown RBP5.09□□□□□ -1.6
HERC1-201ENST00000443617 ALDOAP04075 364 aaKnown RBP5.09□□□□□ -1.6
HERC1-201ENST00000443617 MGAT1P26572 445 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 HPCAL1P37235 193 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 LSM12Q3MHD2 195 aaKnown RBP5.09□□□□□ -1.6
HERC1-201ENST00000443617 TXNRD3NBQ6F5E7 133 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 PRR23CQ6ZRP0 262 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 ZBTB33Q86T24 672 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 RNF135Q8IUD6 432 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 DAW1Q8N136 415 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 CCNYQ8ND76 341 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 SH3YL1Q96HL8 342 aaPredicted RBP5.09□□□□□ -1.6
HERC1-201ENST00000443617 CDHR1Q96JP9 859 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 ANKMY1Q9P2S6 941 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 RABL2AQ9UBK7 228 aaPredicted RBP5.09□□□□□ -1.6
HERC1-201ENST00000443617 BTBD3Q9Y2F9 522 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 V9GYQ6 96 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 SPEF2Q9C093 1822 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 A8MU76 341 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 TIMM44O43615 452 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 TRIM32Q13049 653 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 IQSEC1Q6DN90 963 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 GK5Q6ZS86 529 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 NEK10Q6ZWH5 1172 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 SPPL2CQ8IUH8 684 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 TDRD1Q9BXT4 1180 aaKnown RBP5.09□□□□□ -1.6
HERC1-201ENST00000443617 AGPAT4Q9NRZ5 378 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 SLC17A6Q9P2U8 582 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 COPG1Q9Y678 874 aaKnown RBP5.09□□□□□ -1.6
HERC1-201ENST00000443617 C3P01024 1663 aa5.09□□□□□ -1.6
HERC1-201ENST00000443617 A0A1W2PQ72 361 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 NDUFS2O75306 463 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 GABBR2O75899 941 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CHRNB1P11230 501 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 ZFP69Q49AA0 526 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 FAM117BQ6P1L5 589 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 ZNF778Q96MU6 729 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 ACE2Q9BYF1 805 aaPredicted RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 CISHQ9NSE2 258 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 PIH1D1Q9NWS0 290 aaKnown RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 SOCS2O14508 198 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 GNL1P36915 607 aaPredicted RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 OFCC1Q8IZS5 231 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CNDP2Q96KP4 475 aaKnown RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 CEP19Q96LK0 163 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 ST6GALNAC4Q9H4F1 302 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 VANGL2Q9ULK5 521 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 COQ4Q9Y3A0 265 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 EIF3FO00303 357 aaPredicted RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 PLOD2O00469 737 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 RIMBP2O15034 1052 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 NRP2O60462 931 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 RPS9P46781 194 aaKnown RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 SOX10P56693 466 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 E2F2Q14209 437 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 SLC27A3Q5K4L6 730 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 UBE2UQ5VVX9 321 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 STK32CQ86UX6 486 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 SYTL1Q8IYJ3 562 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 C8orf59Q8N0T1 100 aaPredicted RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 ZNF781Q8N8C0 355 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 POC5Q8NA72 575 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 BCL9O00512 1426 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 MTSS1O43312 755 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 FYNP06241 537 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CDO1Q16878 200 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 HORMAD1Q86X24 394 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 RXFP2Q8WXD0 754 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 C17orf80Q9BSJ5 609 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 TBC1D13Q9NVG8 400 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 LRP6O75581 1613 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 K7ERI5 159 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 M0QYV0 167 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 BNIP2Q12982 314 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 ARHGEF16Q5VV41 709 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 MIER2Q8N344 545 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 RDH11Q8TC12 318 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CANT1Q8WVQ1 401 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 PROX1Q92786 737 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 FAM163AQ96GL9 167 aaPredicted RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 CCM2LQ9NUG4 571 aaPredicted RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 SNTG2Q9NY99 539 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 MTRRQ9UBK8 725 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms