RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 DENND1BQ6P3S1 775 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 XKR5Q6UX68 686 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 EFL1Q7Z2Z2 1120 aaKnown RBP14.74□□□□□ -0.05
HMGN1-208ENST00000443046 PPM1KQ8N3J5 372 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 WDR36Q8NI36 951 aaKnown RBP14.74□□□□□ -0.05
HMGN1-208ENST00000443046 RPRD1AQ96P16 312 aaPredicted RBP14.74□□□□□ -0.05
HMGN1-208ENST00000443046 SLC2A13Q96QE2 648 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 MED15Q96RN5 788 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 BOCQ9BWV1 1114 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 METTL14Q9HCE5 456 aaKnown RBP14.74□□□□□ -0.05
HMGN1-208ENST00000443046 VPS28Q9UK41 221 aa14.74□□□□□ -0.05
HMGN1-208ENST00000443046 CPED1A4D0V7 1026 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 K7ERQ8 282 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 KPNA3O00505 521 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-208ENST00000443046 CASC3O15234 703 aaKnown RBP14.73□□□□□ -0.05
HMGN1-208ENST00000443046 RAD51BO15315 384 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 AQP9O43315 295 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 BNIP3LO60238 219 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 CLDN11O75508 207 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 ZNF821O75541 412 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-208ENST00000443046 PRNPP04156 253 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 CCR1P32246 355 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
HMGN1-208ENST00000443046 PERM1Q5SV97 790 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 PTAR1Q7Z6K3 402 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-208ENST00000443046 PARGQ86W56 976 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 ARL14Q8N4G2 192 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 CHST14Q8NCH0 376 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 CCNL2Q96S94 520 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-208ENST00000443046 KLF6Q99612 283 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-208ENST00000443046 SLC17A9Q9BYT1 436 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 GOLPH3LQ9H4A5 285 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 STARD5Q9NSY2 213 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 ATXN7L1Q9ULK2 861 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-208ENST00000443046 FARP1Q9Y4F1 1045 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-208ENST00000443046 HS3ST4Q9Y661 456 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 LRRK2Q5S007 2527 aa14.73□□□□□ -0.05
HMGN1-208ENST00000443046 NBPF19A0A087WUL8 3843 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 DOPEY2Q9Y3R5 2298 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 A0A1W2PQ27 194 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 A0A1W2PQ64 194 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 SPINT1O43278 529 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 SMAD6O43541 496 aaKnown RBP14.72□□□□□ -0.05
HMGN1-208ENST00000443046 SNAP91O60641 907 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 ZNF202O95125 648 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 TNFSF15O95150 251 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 PCDH8O95206 1070 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 PAK4O96013 591 aaPredicted RBP14.72□□□□□ -0.05
HMGN1-208ENST00000443046 ITGA2BP08514 1039 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 ITGB6P18564 788 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 RABIFP47224 123 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 CDH4P55283 916 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 RPS21P63220 83 aaKnown RBP14.72□□□□□ -0.05
HMGN1-208ENST00000443046 TPRG1LQ5T0D9 272 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 KIAA1161Q6NSJ0 714 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 RRAGAQ7L523 313 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 PRICKLE2Q7Z3G6 844 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 C14orf80Q86SX3 495 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 ARHGEF19Q8IW93 802 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 ATP11CQ8NB49 1132 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 RNF34Q969K3 372 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 SPATA32Q96LK8 384 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 CCDC114Q96M63 670 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 KREMEN1Q96MU8 473 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 LENG8Q96PV6 779 aaPredicted RBP14.72□□□□□ -0.05
HMGN1-208ENST00000443046 VPS51Q9UID3 782 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 ACSL6Q9UKU0 697 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 VANGL2Q9ULK5 521 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 WASF2Q9Y6W5 498 aa14.72□□□□□ -0.05
HMGN1-208ENST00000443046 TRIM49BA6NDI0 452 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 H3BM21 787 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 NTN3O00634 580 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-208ENST00000443046 P4HA2O15460 535 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 NOBOXO60393 691 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 CNTN5O94779 1100 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 CENPBP07199 599 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-208ENST00000443046 GLI1P08151 1106 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 RRM1P23921 792 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 CLCN6P51797 869 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 KRT83P78385 493 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 CDK17Q00537 523 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 LRRC63Q05C16 580 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 NFATC3Q12968 1075 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 EIF2B5Q13144 721 aaKnown RBP14.71□□□□□ -0.05
HMGN1-208ENST00000443046 MTA1Q13330 715 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 DRAP1Q14919 205 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-208ENST00000443046 NR0B2Q15466 257 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 DEFB133Q30KQ1 61 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 ARSIQ5FYB1 569 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 ARTNQ5T4W7 220 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 ZNF658Q5TYW1 1059 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-208ENST00000443046 ZNF683Q8IZ20 524 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 DEFB106AQ8N104 65 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 WDR48Q8TAF3 677 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 ZNF606Q8WXB4 792 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 LIN37Q96GY3 246 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-208ENST00000443046 FEM1CQ96JP0 617 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 TSG101Q99816 390 aa14.71□□□□□ -0.05
HMGN1-208ENST00000443046 C2orf49Q9BVC5 232 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-208ENST00000443046 C1QTNF2Q9BXJ5 285 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms