RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 UBE2TQ9NPD8 197 aaPredicted RBP20.91■□□□□ 0.94
TMEM50B-204ENST00000442441 GPR27Q9NS67 375 aa20.91■□□□□ 0.94
TMEM50B-204ENST00000442441 VPS51Q9UID3 782 aa20.91■□□□□ 0.94
TMEM50B-204ENST00000442441 SSUH2Q9Y2M2 353 aa20.91■□□□□ 0.94
TMEM50B-204ENST00000442441 HS3ST3A1Q9Y663 406 aa20.91■□□□□ 0.94
TMEM50B-204ENST00000442441 NAV2Q8IVL1 2488 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 B8ZZF3 427 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 RNF103O00237 685 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 GRAP2O75791 330 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 C6P13671 934 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 CD44P16070 742 aaKnown RBP20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 RRM1P23921 792 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 NME3Q13232 169 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 C3orf38Q5JPI3 329 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 OR6B2Q6IFH4 312 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 TTI2Q6NXR4 508 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 ZCCHC8Q6NZY4 707 aaKnown RBP20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 TRIM59Q8IWR1 403 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 CHST14Q8NCH0 376 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 ZNF548Q8NEK5 533 aaPredicted RBP20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 GRAMD1AQ96CP6 724 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 BMFQ96LC9 184 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 CPXM1Q96SM3 734 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 SIK2Q9H0K1 926 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 SATB2Q9UPW6 733 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 TRPM6Q9BX84 2022 aa20.9■□□□□ 0.94
TMEM50B-204ENST00000442441 HECTD1Q9ULT8 2610 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 SMAD6O43541 496 aaKnown RBP20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 CNTN5O94779 1100 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 CSF2P04141 144 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 RHOCP08134 193 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 TGM2P21980 687 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 RBMS1P29558 406 aaKnown RBP20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 PPP1R2P41236 205 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 CLCN6P51797 869 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 FZD2Q14332 565 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 ARSIQ5FYB1 569 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 ISM2Q6H9L7 571 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 WDTC1Q8N5D0 677 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 GRIN3AQ8TCU5 1115 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 PPP1R16AQ96I34 528 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 PPP1R13BQ96KQ4 1090 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 SLC46A1Q96NT5 459 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 SLC17A9Q9BYT1 436 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 NCKIPSDQ9NZQ3 722 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 IL36AQ9UHA7 158 aa20.89■□□□□ 0.93
TMEM50B-204ENST00000442441 SPTY2D1-AS1A0A0U1RR47 76 aa20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 A0A1W2PNU3 283 aaPredicted RBP20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 POM121BA6NF01 834 aa20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 AFPP02771 609 aaKnown RBP20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 NME1P15531 152 aaKnown RBP20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 RPS21P63220 83 aaKnown RBP20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 CDKN3Q16667 212 aa20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 ALFQ53S48 1182 aa20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 KLHL10Q6JEL2 608 aa20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 LINGO4Q6UY18 593 aa20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 KYAT3Q6YP21 454 aaKnown RBP20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 ENOSF1Q7L5Y1 443 aa20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 DCAF4L2Q8NA75 395 aa20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 ATXN7L3BQ96GX2 97 aa20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 TNKS2Q9H2K2 1166 aa20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 HOOK1Q9UJC3 728 aaKnown RBP20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 CSNK1G3Q9Y6M4 447 aa20.88■□□□□ 0.93
TMEM50B-204ENST00000442441 SPTA1P02549 2419 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 CPED1A4D0V7 1026 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 H3BM21 787 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 RIOK3O14730 519 aaKnown RBP20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 LEFTY1O75610 366 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 PAK4O96013 591 aaPredicted RBP20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 RECQLP46063 649 aaPredicted RBP20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 NEK3P51956 506 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 SKOR1P84550 965 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 MAPK8IP2Q13387 824 aaPredicted RBP20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 FGL2Q14314 439 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 KIAA1161Q6NSJ0 714 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 C22orf39Q6P5X5 142 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 FOXR2Q6PJQ5 311 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 DPY19L3Q6ZPD9 716 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 C11orf57Q6ZUT1 292 aaPredicted RBP20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 FAM183BPQ6ZVS7 135 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 EFL1Q7Z2Z2 1120 aaKnown RBP20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 SETD3Q86TU7 594 aaPredicted RBP20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 PARGQ86W56 976 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 CCDC97Q96F63 343 aaPredicted RBP20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 MED8Q96G25 268 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 FEM1CQ96JP0 617 aa20.87■□□□□ 0.93
TMEM50B-204ENST00000442441 COL27A1Q8IZC6 1860 aaPredicted RBP20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 A0A0D9SEW6 157 aa20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 K7ENP7 123 aa20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 M0QYT0 321 aa20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 DAB1O75553 588 aa20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 GNA14O95837 355 aa20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 NOS2P35228 1153 aa20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 RABIFP47224 123 aa20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 GUSBP11Q6P575 273 aa20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 INO80CQ6PI98 192 aaPredicted RBP20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 OLFML1Q6UWY5 402 aa20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 TPCN2Q8NHX9 752 aa20.86■□□□□ 0.93
TMEM50B-204ENST00000442441 NELFBQ8WX92 580 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms