RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CALN1Q9BXU9 219 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 ANLNQ9NQW6 1124 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 TMPRSS4Q9NRS4 437 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 FAM207AQ9NSI2 230 aaPredicted RBP12.03□□□□□ -0.48
TTC28-203ENST00000442232 ARHGAP20Q9P2F6 1191 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 PPARGC1AQ9UBK2 798 aaKnown RBP12.03□□□□□ -0.48
TTC28-203ENST00000442232 HPCAL4Q9UM19 191 aa12.03□□□□□ -0.48
TTC28-203ENST00000442232 ZFYVE26Q68DK2 2539 aa12.02□□□□□ -0.48
TTC28-203ENST00000442232 TRABD2BA6NFA1 517 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 TAF4O00268 1085 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 SMAD6O43541 496 aaKnown RBP12.02□□□□□ -0.49
TTC28-203ENST00000442232 LEFTY1O75610 366 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 ENDOD1O94919 500 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 ALPPL2P10696 532 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 PRLRP16471 622 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 HNRNPA2B1P22626 353 aaKnown RBP12.02□□□□□ -0.49
TTC28-203ENST00000442232 STAT1P42224 750 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 DAB2P98082 770 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 BNIP3Q12983 259 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 DNAJC3Q13217 504 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 ILKQ13418 452 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 POLD3Q15054 466 aaPredicted RBP12.02□□□□□ -0.49
TTC28-203ENST00000442232 KRT31Q15323 416 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 KIAA1161Q6NSJ0 714 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 DPY19L2P1Q6NXN4 242 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 FBXL19Q6PCT2 694 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 SASS6Q6UVJ0 657 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 DPY19L3Q6ZPD9 716 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 ZSCAN30Q86W11 494 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 SPATS2Q86XZ4 545 aaKnown RBP12.02□□□□□ -0.49
TTC28-203ENST00000442232 ZNF354CQ86Y25 554 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 ZNF683Q8IZ20 524 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 RYBPQ8N488 228 aaPredicted RBP12.02□□□□□ -0.49
TTC28-203ENST00000442232 EMC1Q8N766 993 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 CHST14Q8NCH0 376 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 NEK11Q8NG66 645 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 FAM174AQ8TBP5 190 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 ENOX1Q8TC92 643 aaKnown RBP12.02□□□□□ -0.49
TTC28-203ENST00000442232 SLC20A1Q8WUM9 679 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 KLK6Q92876 244 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 ARRDC3Q96B67 414 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 GBP4Q96PP9 640 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 HEPHQ9BQS7 1158 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 HDAC8Q9BY41 377 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 GANQ9H2C0 597 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 RETREG1Q9H6L5 497 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 ZDHHC6Q9H6R6 413 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 NLRC4Q9NPP4 1024 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 SEPT11Q9NVA2 429 aaKnown RBP12.02□□□□□ -0.49
TTC28-203ENST00000442232 EVA1BQ9NVM1 165 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 DKK4Q9UBT3 224 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 TMEM59LQ9UK28 342 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 NOCTQ9UK39 431 aaKnown RBP12.02□□□□□ -0.49
TTC28-203ENST00000442232 RAXQ9Y2V3 346 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 TDRD6O60522 2096 aaKnown RBP12.02□□□□□ -0.49
TTC28-203ENST00000442232 DMXL2Q8TDJ6 3036 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 WDFY3Q8IZQ1 3526 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 APC2O95996 2303 aa12.02□□□□□ -0.49
TTC28-203ENST00000442232 A6NNZ2 444 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 GOLGA6L22H0YM25 854 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 I6L893 689 aaPredicted RBP12.01□□□□□ -0.49
TTC28-203ENST00000442232 NEMP1O14524 444 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 SDC3O75056 442 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 CAPNS1P04632 268 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 CYP1A1P04798 512 aaPredicted RBP12.01□□□□□ -0.49
TTC28-203ENST00000442232 CALB1P05937 261 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 CKMT2P17540 419 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 MMP8P22894 467 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 GLDCP23378 1020 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 ITGB7P26010 798 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 MAPKAPK2P49137 400 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 ACADVLP49748 655 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 CCNHP51946 323 aaPredicted RBP12.01□□□□□ -0.49
TTC28-203ENST00000442232 TAS2R38P59533 333 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 RPS21P63220 83 aaKnown RBP12.01□□□□□ -0.49
TTC28-203ENST00000442232 CYP4F3Q08477 520 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
TTC28-203ENST00000442232 CARD16Q5EG05 197 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 SFMBT2Q5VUG0 894 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 CDKAL1Q5VV42 579 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 C19orf48Q6RUI8 117 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 PTAR1Q7Z6K3 402 aaPredicted RBP12.01□□□□□ -0.49
TTC28-203ENST00000442232 MARCH9Q86YJ5 346 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 DCP2Q8IU60 420 aaKnown RBP12.01□□□□□ -0.49
TTC28-203ENST00000442232 RXFP2Q8WXD0 754 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 TBC1D31Q96DN5 1066 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 SELENOOQ9BVL4 669 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 FZD3Q9NPG1 666 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 ADAM22Q9P0K1 906 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 OR12D3Q9UGF7 316 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 CA5BQ9Y2D0 317 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 GPSM3Q9Y4H4 160 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 CACNA1GO43497 2377 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 MYLKQ15746 1914 aa12.01□□□□□ -0.49
TTC28-203ENST00000442232 CHD5Q8TDI0 1954 aa12□□□□□ -0.49
TTC28-203ENST00000442232 CXorf51AA0A1B0GTR3 108 aa12□□□□□ -0.49
TTC28-203ENST00000442232 RAMP2O60895 175 aa12□□□□□ -0.49
TTC28-203ENST00000442232 KRT3P12035 628 aa12□□□□□ -0.49
TTC28-203ENST00000442232 ADRB3P13945 408 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms