RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 AMPD1P23109 780 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 KDELR1P24390 212 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 SLC8A1P32418 973 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 CARD16Q5EG05 197 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 C11orf63Q6NUN7 778 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 CPNE8Q86YQ8 564 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 LRRC49Q8IUZ0 686 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 RHOT1Q8IXI2 618 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 NPWQ8N729 165 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 FAF2Q96CS3 445 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 TOE1Q96GM8 510 aaKnown RBP15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 ZNF419Q96HQ0 510 aaPredicted RBP15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 CELF6Q96J87 481 aaKnown RBP15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 BTBD1Q9H0C5 482 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 PDFQ9HBH1 243 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 CD93Q9NPY3 652 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 DDX56Q9NY93 547 aaKnown RBP15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 ALG6Q9Y672 507 aa15.32■□□□□ 0.04
CSNK1E-210ENST00000442216 ANKRD36A6QL64 1941 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 BCLAF3A2AJT9 711 aaKnown RBP15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 RCCD1A6NED2 376 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 MID1O15344 667 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 SPOPO43791 374 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 FOXD2O60548 495 aaPredicted RBP15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 BUB1BO60566 1050 aaPredicted RBP15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 PRAMEF11O60813 436 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 IL1BP01584 269 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 COMTP21964 271 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 CHRNA3P32297 505 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 HOXD12P35452 270 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 GJC1P36383 396 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 PSMD8P48556 350 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 PAPOLAP51003 745 aaKnown RBP15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 SNRPD1P62314 119 aaKnown RBP15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 IL10RBQ08334 325 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 CCDC15Q0P6D6 951 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 RFTN1Q14699 578 aaPredicted RBP15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 ANKRD20A8PQ5CZ79 823 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 CACUL1Q86Y37 369 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 TMEFF1Q8IYR6 380 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 ACRBPQ8NEB7 543 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 TPCN2Q8NHX9 752 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 PIP4K2CQ8TBX8 421 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 FAM131CQ96AQ9 280 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 LRIG1Q96JA1 1093 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 OMDQ99983 421 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 HINFPQ9BQA5 517 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 HEPHQ9BQS7 1158 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 CALN1Q9BXU9 219 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 FBXL12Q9NXK8 326 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 UBA2Q9UBT2 640 aaPredicted RBP15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 IL36AQ9UHA7 158 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 FCF1Q9Y324 198 aaKnown RBP15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 RIF1Q5UIP0 2472 aaKnown RBP15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 PIEZO1Q92508 2521 aa15.31■□□□□ 0.04
CSNK1E-210ENST00000442216 ARHGAP6O43182 974 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 SLC7A4O43246 635 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 PSTPIP1O43586 416 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 BNIP3LO60238 219 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 TMCC1O94876 653 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 CD48P09326 243 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 DHPSP49366 369 aaPredicted RBP15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 ZNF33AQ06730 810 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 MMRN1Q13201 1228 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 PAFAH1B3Q15102 231 aaKnown RBP15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 PLA2G2CQ5R387 149 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 ZFYVE27Q5T4F4 411 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 TMCO4Q5TGY1 634 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 PEAR1Q5VY43 1037 aaPredicted RBP15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 LYSMD4Q5XG99 296 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 DPY19L3Q6ZPD9 716 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 KIAA1328Q86T90 577 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 OR2AP1Q8NGE2 309 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 PCDH19Q8TAB3 1148 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 ZNF599Q96NL3 588 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 LACRTQ9GZZ8 138 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 TNKS2Q9H2K2 1166 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 SP110Q9HB58 689 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 ETNK2Q9NVF9 386 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 TPX2Q9ULW0 747 aaKnown RBP15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 TFR2Q9UP52 801 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 ACTL7AQ9Y615 435 aa15.3■□□□□ 0.04
CSNK1E-210ENST00000442216 GON4LQ3T8J9 2241 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 VPS13AQ96RL7 3174 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 ZFHX2Q9C0A1 2572 aaPredicted RBP15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 A0A1W2PP55 124 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 LRRD1A4D1F6 860 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 METTL12A8MUP2 240 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 J3KR12 359 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 DFFAO00273 331 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 POP4O95707 220 aaKnown RBP15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 SEMA4FO95754 770 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 IGSF6O95976 241 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 CTSLP07711 333 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 ZNF806P0C7X5 589 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 ACSL1P33121 698 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 DRD3P35462 400 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 MPLP40238 635 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 CCNHP51946 323 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms