RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 TBC1D3IA0A087WXS9 549 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TBC1D3EA0A087X179 549 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TBC1D3KA0A087X1G2 549 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TBC1D3FA6NER0 549 aaPredicted RBP19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TBC1D3LB9A6J9 549 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 BNIP3LO60238 219 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TBC1D3HP0C7X1 549 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 L1CAMP32004 1257 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 MAMLD1Q13495 774 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 POM121L1PQ3SYA9 428 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TBC1D3GQ6DHY5 549 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TBC1D3CQ6IPX1 549 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 PLEKHA7Q6IQ23 1121 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 RWDD4Q6NW29 188 aaKnown RBP19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 ZNF571Q7Z3V5 609 aaPredicted RBP19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TRIM69Q86WT6 500 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TBC1D3Q8IZP1 549 aaPredicted RBP19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 PYROXD2Q8N2H3 581 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 BAHD1Q8TBE0 780 aaPredicted RBP19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 ARRDC3Q96B67 414 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TBC1D31Q96DN5 1066 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 CCDC114Q96M63 670 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 CNPY3Q9BT09 278 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 TNKS2Q9H2K2 1166 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 DNAI1Q9UI46 699 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 PCOLCE2Q9UKZ9 415 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 FZD10Q9ULW2 581 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 WASF2Q9Y6W5 498 aa19.32■□□□□ 0.68
HMGB3P22-201ENST00000442010 KCNK3O14649 394 aa19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 PBX1P40424 430 aa19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 TRIP6Q15654 476 aaKnown RBP19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 ASIC2Q16515 512 aa19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 FIGNQ5HY92 759 aa19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 SFMBT2Q5VUG0 894 aa19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 PPP1R2P3Q6NXS1 205 aa19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 DPY19L3Q6ZPD9 716 aa19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 LUZP1Q86V48 1076 aa19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 DNAAF5Q86Y56 855 aa19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 VOPP1Q96AW1 172 aa19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 MAGEH1Q9H213 219 aa19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 NOL6Q9H6R4 1146 aaKnown RBP19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 FARP1Q9Y4F1 1045 aaPredicted RBP19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 KMT2BQ9UMN6 2715 aaPredicted RBP19.31■□□□□ 0.68
HMGB3P22-201ENST00000442010 TDRD6O60522 2096 aaKnown RBP19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 TMCO5BA8MYB1 307 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 H0Y8X5 98 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 DDX3XO00571 662 aaKnown RBP eCLIP19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 PRNPP04156 253 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 GZMAP12544 262 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 CD38P28907 300 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 ETFBP38117 255 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 AIF1P55008 147 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 DCUN1D2Q6PH85 259 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 GLRX5Q86SX6 157 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 PCDH20Q8N6Y1 951 aaKnown RBP19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 TMEM121BQ9BXQ6 578 aaPredicted RBP19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 IL36AQ9UHA7 158 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 FCF1Q9Y324 198 aaKnown RBP19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 USP24Q9UPU5 2620 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 FRYQ5TBA9 3013 aa19.3■□□□□ 0.68
HMGB3P22-201ENST00000442010 ASPMQ8IZT6 3477 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 ANKRD62A6NC57 917 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 WASH4PA8MWX3 477 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 KPNA3O00505 521 aaPredicted RBP19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 ATMINO43313 823 aaPredicted RBP19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 PCDHGA12O60330 932 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 LEFTY1O75610 366 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 SERPINC1P01008 464 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 SPINK2P20155 84 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 FANCCQ00597 558 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 CARD16Q5EG05 197 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 ARSIQ5FYB1 569 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 EFHC2Q5JST6 749 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 NAPEPLDQ6IQ20 393 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 SCYL2Q6P3W7 929 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 TMC6Q7Z403 805 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 ADAT2Q7Z6V5 191 aaKnown RBP19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 PRPF39Q86UA1 669 aaKnown RBP19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 PLPP6Q8IY26 295 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 ARFGAP1Q8N6T3 406 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 RTL3Q8N8U3 475 aaKnown RBP19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 ISG20Q96AZ6 181 aaKnown RBP19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 SERAC1Q96JX3 654 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 SCNM1Q9BWG6 230 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 HDAC8Q9BY41 377 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 PREBQ9HCU5 417 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 PARVAQ9NVD7 372 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 BTBD3Q9Y2F9 522 aa19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 COL5A1P20908 1838 aaPredicted RBP19.29■□□□□ 0.68
HMGB3P22-201ENST00000442010 A0A1B0GTQ1 180 aa19.28■□□□□ 0.68
HMGB3P22-201ENST00000442010 FLRT2O43155 660 aa19.28■□□□□ 0.68
HMGB3P22-201ENST00000442010 RAMP2O60895 175 aa19.28■□□□□ 0.68
HMGB3P22-201ENST00000442010 NUDT1P36639 197 aa19.28■□□□□ 0.68
HMGB3P22-201ENST00000442010 CCT8P50990 548 aa19.28■□□□□ 0.68
HMGB3P22-201ENST00000442010 C21orf59P57076 290 aa19.28■□□□□ 0.68
HMGB3P22-201ENST00000442010 POLD3Q15054 466 aaPredicted RBP19.28■□□□□ 0.68
HMGB3P22-201ENST00000442010 SHBQ15464 509 aa19.28■□□□□ 0.68
HMGB3P22-201ENST00000442010 NEK5Q6P3R8 708 aa19.28■□□□□ 0.68
HMGB3P22-201ENST00000442010 ERN2Q76MJ5 926 aaKnown RBP19.28■□□□□ 0.68
HMGB3P22-201ENST00000442010 GRIN3AQ8TCU5 1115 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms