RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 MARCH4Q9P2E8 410 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-209ENST00000441871 DBF4Q9UBU7 674 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-209ENST00000441871 CHMP2BQ9UQN3 213 aa4.04□□□□□ -1.76
R3HDM1-209ENST00000441871 MTMR6Q9Y217 621 aa4.04□□□□□ -1.76
R3HDM1-209ENST00000441871 KCNK7Q9Y2U2 307 aa4.04□□□□□ -1.76
R3HDM1-209ENST00000441871 COQ6Q9Y2Z9 468 aa4.04□□□□□ -1.76
R3HDM1-209ENST00000441871 COL17A1Q9UMD9 1497 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-209ENST00000441871 KIF27Q86VH2 1401 aa4.04□□□□□ -1.76
R3HDM1-209ENST00000441871 A0A075B6Q4 140 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 A0A1B0GTQ1 180 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 LOC105371267A0A1B0GV96 52 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 CCDC162PA2VCL2 907 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 SLC22A31A6NKX4 558 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 ZNF716A6NP11 495 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 SPECC1L-ADORA2AF8WAN1 911 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 GOLGA8RI6L899 631 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 HIP1O00291 1037 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 CRCPO75575 148 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 MFN2O95140 757 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 PCDH8O95206 1070 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 HTR3BO95264 441 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 LGI1O95970 557 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 AK1P00568 194 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 TP53P04637 393 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 CYP2E1P05181 493 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 PRKCBP05771 671 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 EPHX1P07099 455 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 ACAA1P09110 424 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 ZNF735P0CB33 412 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 SELLP14151 372 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 CTRB1P17538 263 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 CYP2A7P20853 494 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 HNRNPA2B1P22626 353 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 AHCYP23526 432 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 ITGB8P26012 769 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 MAP4P27816 1152 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 GCKP35557 465 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 CAPGP40121 348 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 CDKN1BP46527 198 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 GABRB2P47870 512 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 ARL4DP49703 201 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 NPY4RP50391 375 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 PNLIPRP1P54315 467 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 OAZ1P54368 228 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 MLLT6P55198 1093 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 RAB14P61106 215 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 ACTR3P61158 418 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 STX1BP61266 288 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 RNF4P78317 190 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 ATP11AP98196 1134 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 SPIBQ01892 262 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 GCNT1Q02742 428 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 SPIRE1Q08AE8 756 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 TMEM62Q0P6H9 643 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 SF3A3Q12874 501 aaKnown RBP eCLIP4.03□□□□□ -1.769e-7■□□□□ 11
R3HDM1-209ENST00000441871 OVGP1Q12889 678 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 LCP2Q13094 533 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 NOGQ13253 232 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 SPCS2Q15005 226 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 RRS1Q15050 365 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 PON2Q15165 354 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 SF1Q15637 639 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 FAM187BQ17R55 369 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 KRT24Q2M2I5 525 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 PCGF3Q3KNV8 242 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 TMEM177Q53S58 311 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 CCDC157Q569K6 752 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 TTMPQ5BVD1 217 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 CFAP157Q5JU67 520 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 SAPCD1Q5SSQ6 148 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 THEM4Q5T1C6 240 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 ZNF658Q5TYW1 1059 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 GKAP1Q5VSY0 366 aaPredicted RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 CTRB2Q6GPI1 263 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 NCAPH2Q6IBW4 605 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 NEPROQ6NW34 567 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 GALNT18Q6P9A2 607 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 BLOC1S2Q6QNY1 142 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 EFL1Q7Z2Z2 1120 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 KRT28Q7Z3Y7 464 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 SLC51AQ86UW1 340 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 LINC00346Q8IVM7 164 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 FRMD1Q8N878 549 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 RCBTB1Q8NDN9 531 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 OR2T34Q8NGX1 318 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 TEX47Q8TBZ9 253 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 METTL6Q8TCB7 284 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 CPT1CQ8TCG5 803 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 LRRC8CQ8TDW0 803 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 DYDC1Q8WWB3 177 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 IRGQQ8WZA9 623 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 SEC14L1Q92503 715 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 GFM2Q969S9 779 aaKnown RBP4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 NT5C3BQ969T7 300 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 RHBDF1Q96CC6 855 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 ACSBG1Q96GR2 724 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 FGD4Q96M96 766 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 NSMCE2Q96MF7 247 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 PTCHD1Q96NR3 888 aa4.03□□□□□ -1.76
R3HDM1-209ENST00000441871 TRNT1Q96Q11 434 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms