RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 TRAF2Q12933 501 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 TTC27Q6P3X3 843 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 TFAP2DQ7Z6R9 452 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 GPSM1Q86YR5 675 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 LGI2Q8N0V4 545 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 PGBD3Q8N328 593 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 METTL6Q8TCB7 284 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 GPR20Q99678 358 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 NTPCRQ9BSD7 190 aaKnown RBP13.06□□□□□ -0.32
BRPF3-203ENST00000441123 HGH1Q9BTY7 390 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 ZYG11BQ9C0D3 744 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 PRDM12Q9H4Q4 367 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 BANF1O75531 89 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 CYP2A6P11509 494 aaPredicted RBP13.06□□□□□ -0.32
BRPF3-203ENST00000441123 CHRNB2P17787 502 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 PRDX6P30041 224 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 SMYD5Q6GMV2 418 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 JOSD2Q8TAC2 188 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 DIS3LQ8TF46 1054 aaKnown RBP13.06□□□□□ -0.32
BRPF3-203ENST00000441123 BSNDQ8WZ55 320 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 PTCD3Q96EY7 689 aaKnown RBP13.06□□□□□ -0.32
BRPF3-203ENST00000441123 MPP4Q96JB8 637 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 EXOSC4Q9NPD3 245 aaKnown RBP13.06□□□□□ -0.32
BRPF3-203ENST00000441123 PIH1D1Q9NWS0 290 aaKnown RBP13.06□□□□□ -0.32
BRPF3-203ENST00000441123 SYBUQ9NX95 663 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 BBIP1A8MTZ0 92 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 DCDC2CA8MYV0 355 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 ADM5C9JUS6 153 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 BTN3A1O00481 513 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 INPP4BO15327 924 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 PHGDHO43175 533 aaKnown RBP13.06□□□□□ -0.32
BRPF3-203ENST00000441123 CNOT3O75175 753 aaKnown RBP13.06□□□□□ -0.32
BRPF3-203ENST00000441123 HALP42357 657 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 ATP6V0D1P61421 351 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 PSMD5Q16401 504 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 TRIM60Q495X7 471 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 STXBP5Q5T5C0 1151 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 SDE2Q6IQ49 451 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 METTL3Q86U44 580 aaKnown RBP13.06□□□□□ -0.32
BRPF3-203ENST00000441123 FAM126BQ8IXS8 530 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 ULK2Q8IYT8 1036 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 GLMNQ92990 594 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 ACE2Q9BYF1 805 aaPredicted RBP13.06□□□□□ -0.32
BRPF3-203ENST00000441123 COPS7BQ9H9Q2 264 aaPredicted RBP13.06□□□□□ -0.32
BRPF3-203ENST00000441123 CCDC167Q9P0B6 97 aa13.06□□□□□ -0.32
BRPF3-203ENST00000441123 SMIM35A0A1B0GVV1 85 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 A0A1W2PPM1 405 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 ZNF682O95780 498 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 FGFR1P11362 822 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 CYP3A5P20815 502 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 PTPN9P43378 593 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 PPP1R26Q5T8A7 1209 aaPredicted RBP13.05□□□□□ -0.32
BRPF3-203ENST00000441123 FAM126AQ9BYI3 521 aaPredicted RBP13.05□□□□□ -0.32
BRPF3-203ENST00000441123 STARD7Q9NQZ5 370 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 R3HDM2Q9Y2K5 976 aaKnown RBP13.05□□□□□ -0.32
BRPF3-203ENST00000441123 ATRNL1Q5VV63 1379 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 KCNH1O95259 989 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 PSME3P61289 254 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 C9orf57Q5W0N0 161 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 B3GNT6Q6ZMB0 384 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 NIPA2Q8N8Q9 360 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 ZCCHC2Q9C0B9 1178 aaKnown RBP13.05□□□□□ -0.32
BRPF3-203ENST00000441123 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.05□□□□□ -0.32
BRPF3-203ENST00000441123 LEF1Q9UJU2 399 aaPredicted RBP13.05□□□□□ -0.32
BRPF3-203ENST00000441123 MAGEC1O60732 1142 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 CKMP06732 381 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 PYDC1Q8WXC3 89 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 CPT1BQ92523 772 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 GRHL1Q9NZI5 618 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 LNPEPQ9UIQ6 1025 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 CLCA2Q9UQC9 943 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 C5orf60A6NFR6 353 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 AHCYL1O43865 530 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 BCL10O95999 233 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 SLC25A3Q00325 362 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 TNK2Q07912 1038 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 ITFG1Q8TB96 612 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 IRGQQ8WZA9 623 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 FIG4Q92562 907 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 PWWP2AQ96N64 755 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 ADPRHL2Q9NX46 363 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 DPP7Q9UHL4 492 aa13.05□□□□□ -0.32
BRPF3-203ENST00000441123 RPTORQ8N122 1335 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 SNED1Q8TER0 1413 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 GCATO75600 419 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 ANXA6P08133 673 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 TTPAP49638 278 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 ARMC12Q5T9G4 340 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 EEF1DP3Q658K8 133 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 MCOLN3Q8TDD5 553 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 CLEC4DQ8WXI8 215 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 GNPTGQ9UJJ9 305 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 COMMD3-BMI1R4GMX3 469 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 NUP188Q5SRE5 1749 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
BRPF3-203ENST00000441123 USP12O75317 370 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 CPSF4O95639 269 aaKnown RBP13.04□□□□□ -0.32
BRPF3-203ENST00000441123 FAM171A1Q5VUB5 890 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 SDCBP2Q9H190 292 aa13.04□□□□□ -0.32
BRPF3-203ENST00000441123 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms