RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ARHGAP25P42331 645 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 UCNP55089 124 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 TBX4P57082 545 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 GCNT1Q02742 428 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 UBXN1Q04323 297 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 RBBP5Q15291 538 aaKnown RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 MAN2A1Q16706 1144 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 COL28A1Q2UY09 1125 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 NAPEPLDQ6IQ20 393 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 CYB5D1Q6P9G0 228 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 ENOSF1Q7L5Y1 443 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 YTHDF3Q7Z739 585 aaKnown RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 TRIM69Q86WT6 500 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 DCP2Q8IU60 420 aaKnown RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 CNGA4Q8IV77 575 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 PCMTD1Q96MG8 357 aaPredicted RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 NT5C1BQ96P26 610 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 ORAI3Q9BRQ5 295 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 SELENOOQ9BVL4 669 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 NAA15Q9BXJ9 866 aaKnown RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 SLC6A17Q9H1V8 727 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 FSCN3Q9NQT6 498 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 NCKIPSDQ9NZQ3 722 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 ARMCX3Q9UH62 379 aaPredicted RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 CNTN6Q9UQ52 1028 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 PLXNA2O75051 1894 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 A0A1W2PQC6 194 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 TRIM49BA6NDI0 452 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 ATXN7O15265 892 aaPredicted RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 RRP8O43159 456 aaKnown RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 LATO43561 262 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 PPFIA2O75334 1257 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 IGHV4-34P06331 123 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 TUBBP07437 444 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 HMBSP08397 361 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 ATXN1LP0C7T5 689 aaKnown RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 EZRP15311 586 aaKnown RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 MAOBP27338 520 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 MAN1A1P33908 653 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 CSNK1EP49674 416 aaKnown RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 GALCP54803 685 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 TUBB4BP68371 445 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 ADIGQ0VDE8 80 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 ELAVL3Q14576 367 aaKnown RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 CST6Q15828 149 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 WHAMMP3Q1A5X7 153 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 TSNAXIP1Q2TAA8 658 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 CCDC92Q53HC0 331 aaPredicted RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 RNF187Q5TA31 235 aaPredicted RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 MFSD4BQ5TF39 518 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 NAA35Q5VZE5 725 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 RNF219Q5W0B1 726 aaPredicted RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 PRPF39Q86UA1 669 aaKnown RBP6.18□□□□□ -1.42
PTPRR-204ENST00000440835 MFN1Q8IWA4 741 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 LSMEM2Q8N112 164 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 ATP6V0D2Q8N8Y2 350 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 OR2I1PQ8NGU4 316 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 MAGEC3Q8TD91 643 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 SNX19Q92543 992 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 SEMA4DQ92854 862 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 SLC39A13Q96H72 371 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 BTN2A3PQ96KV6 586 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 MED15Q96RN5 788 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 TUBGCP2Q9BSJ2 902 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 VPS16Q9H269 839 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 RRN3Q9NYV6 651 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 ERVW-1Q9UQF0 538 aa6.18□□□□□ -1.42
PTPRR-204ENST00000440835 TEX51A0A1B0GUA7 166 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 A0A1W2PR77 199 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 TRABD2BA6NFA1 517 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 H0Y8X5 98 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 CAPN9O14815 690 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 TBL1XO60907 577 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 LUC7L3O95232 432 aaKnown RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 APOEP02649 317 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 ITGAVP06756 1048 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 ACSL1P33121 698 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 MLLT3P42568 568 aaPredicted RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 ABCG1P45844 678 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 SKOR1P84550 965 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 ECT2LQ008S8 904 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 FAM133BQ5BKY9 247 aaKnown RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 TTMPQ5BVD1 217 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 MS4A13Q5J8X5 152 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 RABGAP1LQ5R372 815 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 IGF2-ASQ6U949 168 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 TRIM74Q86UV6 250 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 TRIM73Q86UV7 250 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 DRAXINQ8NBI3 349 aaPredicted RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 SAP25Q8TEE9 199 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 ARL8AQ96BM9 186 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 SPAG5Q96R06 1193 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 OMDQ99983 421 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 CRACR2AQ9BSW2 395 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 IL21RQ9HBE5 538 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 PREBQ9HCU5 417 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 HAUS2Q9NVX0 235 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 ZNHIT6Q9NWK9 470 aaKnown RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 FBXL12Q9NXK8 326 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 NUDT5Q9UKK9 219 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms