RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 PAPOLAP51003 745 aaKnown RBP18.38■□□□□ 0.53
CPSF4-205ENST00000440514 DNA2P51530 1060 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 GEMIN4P57678 1058 aaKnown RBP18.38■□□□□ 0.53
CPSF4-205ENST00000440514 CREB5Q02930 508 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 SLC20A2Q08357 652 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 SPEM2Q0P670 501 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 ZFYVE27Q5T4F4 411 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 LYSMD4Q5XG99 296 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 TMCO3Q6UWJ1 677 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 DPY19L3Q6ZPD9 716 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 ARHGAP36Q6ZRI8 547 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 CYP2U1Q7Z449 544 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 SLC41A1Q8IVJ1 513 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 AADATQ8N5Z0 425 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 PCDH20Q8N6Y1 951 aaKnown RBP18.38■□□□□ 0.53
CPSF4-205ENST00000440514 PIP4K2CQ8TBX8 421 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 GRIN3AQ8TCU5 1115 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 ANP32BQ92688 251 aaKnown RBP18.38■□□□□ 0.53
CPSF4-205ENST00000440514 CCDC114Q96M63 670 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 HSPA12BQ96MM6 686 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 GPR174Q9BXC1 333 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 SMOC1Q9H4F8 434 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 PDFQ9HBH1 243 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 DONSONQ9NYP3 566 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 SALL4Q9UJQ4 1053 aa18.38■□□□□ 0.53
CPSF4-205ENST00000440514 SDK1Q7Z5N4 2213 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 A0A0A6YYK5 440 aaPredicted RBP18.37■□□□□ 0.53
CPSF4-205ENST00000440514 CXorf51AA0A1B0GTR3 108 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 ZSCAN5CA6NGD5 496 aaPredicted RBP18.37■□□□□ 0.53
CPSF4-205ENST00000440514 ARHGAP42A6NI28 874 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 J3KR12 359 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 RNF103O00237 685 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 SPOPO43791 374 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 RNASEH2AO75792 299 aaKnown RBP18.37■□□□□ 0.53
CPSF4-205ENST00000440514 TMCC1O94876 653 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 KRT1P04264 644 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 COMTP21964 271 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 IL4RP24394 825 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 OXTRP30559 389 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 MPLP40238 635 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 VAV2P52735 878 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 GSDMDP57764 484 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 DSG4Q86SJ6 1040 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 KCTD6Q8NC69 237 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 OR6K2Q8NGY2 324 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 CALR3Q96L12 384 aaKnown RBP18.37■□□□□ 0.53
CPSF4-205ENST00000440514 OMDQ99983 421 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 LACRTQ9GZZ8 138 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 FBXL12Q9NXK8 326 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 RCOR3Q9P2K3 495 aaPredicted RBP18.37■□□□□ 0.53
CPSF4-205ENST00000440514 PPM1HQ9ULR3 514 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 SCML1Q9UN30 329 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 NUP205Q92621 2012 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 NUMA1Q14980 2115 aa18.37■□□□□ 0.53
CPSF4-205ENST00000440514 A0A0U1RQJ8 604 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 BCLAF3A2AJT9 711 aaKnown RBP18.36■□□□□ 0.53
CPSF4-205ENST00000440514 LRRD1A4D1F6 860 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 FAM186AA6NE01 2351 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 GOLGA6L3A6NEY3 463 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 C1QTNF3-AMACRE9PGA6 284 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 NRDCO43847 1150 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 MFSD11O43934 449 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 PRAMEF11O60813 436 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 C5AR1P21730 350 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 CHRNA3P32297 505 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 DRD3P35462 400 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 SLC1A1P43005 524 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 RECQLP46063 649 aaPredicted RBP18.36■□□□□ 0.53
CPSF4-205ENST00000440514 CCNHP51946 323 aaPredicted RBP18.36■□□□□ 0.53
CPSF4-205ENST00000440514 PDK2Q15119 407 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 CARD16Q5EG05 197 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 ATXN7L2Q5T6C5 722 aaPredicted RBP18.36■□□□□ 0.53
CPSF4-205ENST00000440514 USP30Q70CQ3 517 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 KIAA1328Q86T90 577 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 HDDC3Q8N4P3 179 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 PCDH19Q8TAB3 1148 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 RAPGEF5Q92565 580 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 ZNF670Q9BS34 389 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 BTBD1Q9H0C5 482 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 SP110Q9HB58 689 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 UBA2Q9UBT2 640 aaPredicted RBP18.36■□□□□ 0.53
CPSF4-205ENST00000440514 IL36AQ9UHA7 158 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 NCKAP1Q9Y2A7 1128 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 FARP1Q9Y4F1 1045 aaPredicted RBP18.36■□□□□ 0.53
CPSF4-205ENST00000440514 PCDHGA5Q9Y5G8 931 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 WASF2Q9Y6W5 498 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 DUSP10Q9Y6W6 482 aa18.36■□□□□ 0.53
CPSF4-205ENST00000440514 EP300Q09472 2414 aaPredicted RBP18.35■□□□□ 0.53
CPSF4-205ENST00000440514 GVINP1Q7Z2Y8 2422 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 MEI4A8MW99 385 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 KPNA3O00505 521 aaPredicted RBP18.35■□□□□ 0.53
CPSF4-205ENST00000440514 SEMA4FO95754 770 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 ITPKAP23677 461 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 GKP32189 559 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 RHOAP61586 193 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 ZNF33AQ06730 810 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 ANKRD20A8PQ5CZ79 823 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 NCBP2-AS2Q69YL0 99 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 C11orf63Q6NUN7 778 aa18.35■□□□□ 0.53
CPSF4-205ENST00000440514 KIAA2013Q8IYS2 634 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms