RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 RFPL4BQ6ZWI9 263 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 CDKL3Q8IVW4 592 aaPredicted RBP16.04■□□□□ 0.16
DHFR-201ENST00000439211 FAR2Q96K12 515 aa16.04■□□□□ 0.16
DHFR-201ENST00000439211 CAPN14A8MX76 684 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 MAFO75444 373 aaPredicted RBP16.03■□□□□ 0.16
DHFR-201ENST00000439211 COX4I1P13073 169 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 RPL10P27635 214 aaKnown RBP16.03■□□□□ 0.16
DHFR-201ENST00000439211 CYP4V2Q6ZWL3 525 aaPredicted RBP16.03■□□□□ 0.16
DHFR-201ENST00000439211 KYQ8NBH2 561 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 LILRB4Q8NHJ6 448 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 PGBD4Q96DM1 585 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 WDR6Q9NNW5 1121 aaKnown RBP16.03■□□□□ 0.16
DHFR-201ENST00000439211 ZC4H2Q9NQZ6 224 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 THAP1Q9NVV9 213 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 AFG3L2Q9Y4W6 797 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 SF3B1O75533 1304 aaKnown RBP eCLIP16.03■□□□□ 0.161e-7■■■■■ 172.3
DHFR-201ENST00000439211 ACKR2O00590 384 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 TMCC2O75069 709 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 STX1BP61266 288 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 SLC25A11Q02978 314 aaKnown RBP16.03■□□□□ 0.16
DHFR-201ENST00000439211 RAB6CQ53S08 254 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 FAM183BPQ6ZVS7 135 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 RNF157Q96PX1 679 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 MMP19Q99542 508 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 RAB6CQ9H0N0 254 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 CDT1Q9H211 546 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 PDLIM7Q9NR12 457 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 ITGA11Q9UKX5 1188 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 SCN9AQ15858 1988 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 MSCO60682 206 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 STBD1O95210 358 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 CRYZL1O95825 349 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 VDRP11473 427 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 MAGP20916 626 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 TTKP33981 857 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 CATSPERGQ6ZRH7 1159 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 UBE2Q1Q7Z7E8 422 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 SNX32Q86XE0 403 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 CHST13Q8NET6 341 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 DACH2Q96NX9 599 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 CCDC106Q9BWC9 280 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 ELOVL4Q9GZR5 314 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 PKD2L2Q9NZM6 624 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 CYTH4Q9UIA0 394 aa16.03■□□□□ 0.16
DHFR-201ENST00000439211 CXorf49A8MYA2 514 aaPredicted RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 SNPHO15079 494 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 ME2P23368 584 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 ADSLP30566 484 aaPredicted RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 ASPAP45381 313 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 CCDC14Q49A88 953 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 BPIFB6Q8NFQ5 453 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 DEPDC7Q96QD5 511 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 UNKQ9C0B0 810 aaKnown RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 UPF3AQ9H1J1 476 aaKnown RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 RAD21L1Q9H4I0 556 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 CPSF3Q9UKF6 684 aaKnown RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 IFT52Q9Y366 437 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 FARP1Q9Y4F1 1045 aaPredicted RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 ILVBLA1L0T0 632 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 TOR1BO14657 336 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 TOP3BO95985 862 aaKnown RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 ITGAXP20702 1163 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 PRDX6P30041 224 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 ZNF143P52747 638 aaPredicted RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 RBP5P82980 135 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 IFRD2Q12894 506 aaPredicted RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 TRMT10BQ6PF06 316 aaKnown RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 TRAF7Q6Q0C0 670 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 FRMD7Q6ZUT3 714 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 PID1Q7Z2X4 250 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 ZC3H7AQ8IWR0 971 aaKnown RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 C1orf127Q8N9H9 656 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 PCYOX1LQ8NBM8 494 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 TMEM174Q8WUU8 243 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 SCYL1Q96KG9 808 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 B3GNT5Q9BYG0 378 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 SSU72Q9NP77 194 aaKnown RBP16.02■□□□□ 0.16
DHFR-201ENST00000439211 C12orf4Q9NQ89 552 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 PADI4Q9UM07 663 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 STYXL1Q9Y6J8 313 aa16.02■□□□□ 0.16
DHFR-201ENST00000439211 CLDN25C9JDP6 229 aa16.02■□□□□ 0.15
DHFR-201ENST00000439211 FASTKD1Q53R41 847 aaKnown RBP16.02■□□□□ 0.15
DHFR-201ENST00000439211 VWA5B1Q5TIE3 1220 aa16.02■□□□□ 0.15
DHFR-201ENST00000439211 CYP2R1Q6VVX0 501 aa16.02■□□□□ 0.15
DHFR-201ENST00000439211 FAM131BQ86XD5 332 aa16.02■□□□□ 0.15
DHFR-201ENST00000439211 C7orf26Q96N11 449 aa16.02■□□□□ 0.15
DHFR-201ENST00000439211 ADNPQ9H2P0 1102 aa16.02■□□□□ 0.15
DHFR-201ENST00000439211 TP63Q9H3D4 680 aaPredicted RBP16.02■□□□□ 0.15
DHFR-201ENST00000439211 RNPEPQ9H4A4 650 aa16.02■□□□□ 0.15
DHFR-201ENST00000439211 ZFYVE28Q9HCC9 887 aa16.02■□□□□ 0.15
DHFR-201ENST00000439211 M0R3G1 203 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 TPPPO94811 219 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 IL18RAPO95256 599 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 CYP2F1P24903 491 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 OAZ1P54368 228 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 CLDN10P78369 228 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 ZNF846Q147U1 533 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 NOMO1Q15155 1222 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 CDHR3Q6ZTQ4 885 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 ITIH5Q86UX2 942 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms