RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 FBXW8Q8N3Y1 598 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 RYBPQ8N488 228 aaPredicted RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 KYQ8NBH2 561 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 SMARCD1Q96GM5 515 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 SLC2A13Q96QE2 648 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 PAAF1Q9BRP4 392 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 CASS4Q9NQ75 786 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 RBM22Q9NW64 420 aaKnown RBP eCLIP17.01■□□□□ 0.312e-6■■■■■ 27.2
TTC3-209ENST00000438055 GPC4O75487 556 aa17■□□□□ 0.31
TTC3-209ENST00000438055 TFEBP19484 476 aa17■□□□□ 0.31
TTC3-209ENST00000438055 AQP4P55087 323 aa17■□□□□ 0.31
TTC3-209ENST00000438055 TMCO4Q5TGY1 634 aa17■□□□□ 0.31
TTC3-209ENST00000438055 ESRP1Q6NXG1 681 aaKnown RBP17■□□□□ 0.31
TTC3-209ENST00000438055 TTC16Q8NEE8 873 aa17■□□□□ 0.31
TTC3-209ENST00000438055 OR6P1Q8NGX9 317 aa17■□□□□ 0.31
TTC3-209ENST00000438055 PDP2Q9P2J9 529 aa17■□□□□ 0.31
TTC3-209ENST00000438055 SFMBT1Q9UHJ3 866 aa17■□□□□ 0.31
TTC3-209ENST00000438055 PRKCGP05129 697 aa17■□□□□ 0.31
TTC3-209ENST00000438055 HNRNPLP14866 589 aaKnown RBP eCLIP17■□□□□ 0.31
TTC3-209ENST00000438055 LINC00523Q86TU6 105 aa17■□□□□ 0.31
TTC3-209ENST00000438055 FSTL5Q8N475 847 aaPredicted RBP17■□□□□ 0.31
TTC3-209ENST00000438055 GALNT4Q8N4A0 578 aa17■□□□□ 0.31
TTC3-209ENST00000438055 PNPLA1Q8N8W4 532 aa17■□□□□ 0.31
TTC3-209ENST00000438055 KCTD13Q8WZ19 329 aa17■□□□□ 0.31
TTC3-209ENST00000438055 JADE3Q92613 823 aa17■□□□□ 0.31
TTC3-209ENST00000438055 NXNL1Q96CM4 212 aa17■□□□□ 0.31
TTC3-209ENST00000438055 NDNQ99608 321 aa17■□□□□ 0.31
TTC3-209ENST00000438055 PRDM16Q9HAZ2 1276 aa17■□□□□ 0.31
TTC3-209ENST00000438055 TMEM30AQ9NV96 361 aa17■□□□□ 0.31
TTC3-209ENST00000438055 ST3GAL5Q9UNP4 418 aa17■□□□□ 0.31
TTC3-209ENST00000438055 FAM95CA0A1B0GW59 222 aa17■□□□□ 0.31
TTC3-209ENST00000438055 G3V2L1 256 aa17■□□□□ 0.31
TTC3-209ENST00000438055 CSE1LP55060 971 aaKnown RBP17■□□□□ 0.31
TTC3-209ENST00000438055 SLC12A1Q13621 1099 aa17■□□□□ 0.31
TTC3-209ENST00000438055 CCL14Q16627 93 aa17■□□□□ 0.31
TTC3-209ENST00000438055 SCAMP5Q8TAC9 235 aa17■□□□□ 0.31
TTC3-209ENST00000438055 ACTRT2Q8TDY3 377 aa17■□□□□ 0.31
TTC3-209ENST00000438055 TBL1YQ9BQ87 522 aa17■□□□□ 0.31
TTC3-209ENST00000438055 ADAMTS6Q9UKP5 1117 aa17■□□□□ 0.31
TTC3-209ENST00000438055 RAP2CQ9Y3L5 183 aa17■□□□□ 0.31
TTC3-209ENST00000438055 DTNAQ9Y4J8 743 aa17■□□□□ 0.31
TTC3-209ENST00000438055 TMEM233B4DJY2 109 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 CPT1AP50416 773 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 PAPOLAP51003 745 aaKnown RBP16.99■□□□□ 0.31
TTC3-209ENST00000438055 CCNIQ14094 377 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 UGP2Q16851 508 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 SFT2D3Q587I9 215 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 LIPMQ5VYY2 423 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 AAGABQ6PD74 315 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 EPGNQ6UW88 154 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 BNC2Q6ZN30 1099 aaPredicted RBP16.99■□□□□ 0.31
TTC3-209ENST00000438055 PABPC5Q96DU9 382 aaKnown RBP16.99■□□□□ 0.31
TTC3-209ENST00000438055 SLC9A7Q96T83 725 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 RHOJQ9H4E5 214 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 NEMP2A6NFY4 417 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 GRIK1P39086 918 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 PRKAA1Q13131 559 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 GNASQ5JWF2 1037 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 SH2D4BQ5SQS7 431 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 FAM105AQ9NUU6 356 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 ARHGEF38Q9NXL2 777 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 MPP6Q9NZW5 540 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 SLC2A6Q9UGQ3 507 aa16.99■□□□□ 0.31
TTC3-209ENST00000438055 AAR2Q9Y312 384 aaKnown RBP16.99■□□□□ 0.31
TTC3-209ENST00000438055 CAPN8A6NHC0 703 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 AHSGP02765 367 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 CHRNA4P43681 627 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 GRB14Q14449 540 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 PCBP1Q15365 356 aaKnown RBP eCLIP16.98■□□□□ 0.31
TTC3-209ENST00000438055 CMPK2Q5EBM0 449 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 ZNF280DQ6N043 979 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 LAYNQ6UX15 382 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 C16orf89Q6UX73 402 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 TFAP2DQ7Z6R9 452 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 ZNF467Q7Z7K2 595 aaPredicted RBP16.98■□□□□ 0.31
TTC3-209ENST00000438055 ZMIZ2Q8NF64 920 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 PIP4K2CQ8TBX8 421 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 DQX1Q8TE96 717 aaKnown RBP16.98■□□□□ 0.31
TTC3-209ENST00000438055 NTAN1Q96AB6 310 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 HDAC11Q96DB2 347 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 PHF21BQ96EK2 531 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 VAT1Q99536 393 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 OXSMQ9NWU1 459 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 APOA4P06727 396 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 ZC3HC1Q86WB0 502 aaKnown RBP16.98■□□□□ 0.31
TTC3-209ENST00000438055 PHC3Q8NDX5 983 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 ZDHHC2Q9UIJ5 367 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 TMEM114B3SHH9 223 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 TRPA1O75762 1119 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 CD1EP15812 388 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 NT5C3BQ969T7 300 aa16.98■□□□□ 0.31
TTC3-209ENST00000438055 STX16-NPEPL1H3BU86 382 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 CCNT2O60583 730 aaKnown RBP16.97■□□□□ 0.31
TTC3-209ENST00000438055 ANXA9O76027 345 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 SLC4A1P02730 911 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 PAMP19021 973 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 GSTA3Q16772 222 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 NOMO2Q5JPE7 1267 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 PCID2Q5JVF3 399 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 CNTD1Q8N815 330 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms