RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 HNRNPDLO14979 420 aaKnown RBP3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 CLDN7O95471 211 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 SLC5A1P13866 664 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 NPPBP16860 134 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 RFC1P35251 1148 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 PEX5P50542 639 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 CLCNKBP51801 687 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 MYBPHQ13203 477 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 MAP9Q49MG5 647 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 ZNF771Q7L3S4 317 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 ZDHHC23Q8IYP9 409 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 IPO4Q8TEX9 1081 aaKnown RBP3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 BICD1Q96G01 975 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 IFT27Q9BW83 186 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 ABHD16BQ9H3Z7 469 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 SEL1LQ9UBV2 794 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 CNTN6Q9UQ52 1028 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 FAM50BQ9Y247 325 aa3.42□□□□□ -1.86
HMGB1P31-201ENST00000437242 ANTXRLA6NF34 631 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 AGAP5A6NIR3 686 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 NCK2O43639 380 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 FGF18O76093 207 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 LARGE1O95461 756 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 NBPF7P0C2Y1 421 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 TNFSF4P23510 183 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 PRPH2P23942 346 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 TYK2P29597 1187 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 GLIPR1P48060 266 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 MXI1P50539 228 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 RCAN1P53805 252 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 PICALMQ13492 652 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 UBE4AQ14139 1066 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 MYBPC2Q14324 1141 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 ZACNQ401N2 412 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 PLEKHO1Q53GL0 409 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 FAM209BQ5JX69 171 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 TYW3Q6IPR3 259 aaKnown RBP3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 KSR2Q6VAB6 950 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 SMIM29Q86T20 159 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 SECTM1Q8WVN6 248 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 FAR1Q8WVX9 515 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 BRI3BPQ8WY22 251 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 FRG2BQ96QU4 278 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 HDHD5Q9BXW7 423 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 TMEM248Q9NWD8 314 aa3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 BAZ1AQ9NRL2 1556 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P31-201ENST00000437242 MAGEA13PA6NCF6 341 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 ERI2A8K979 691 aaKnown RBP3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 PRAC2D3DTV9 90 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 RNMTO43148 476 aaKnown RBP3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 ANOS1P23352 680 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 DGKAP23743 735 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 GSTM2P28161 218 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 PCP4P48539 62 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 TAF6P49848 677 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 ARL16Q0P5N6 197 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 CTTNQ14247 550 aaKnown RBP3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 SYTL3Q4VX76 610 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 COBLL1Q53SF7 1204 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 C9orf139Q6ZV77 190 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 SERPINA11Q86U17 422 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 SAMD3Q8N6K7 520 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 SVIPQ8NHG7 77 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 NEK9Q8TD19 979 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 HDAC7Q8WUI4 952 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 HMGB4Q8WW32 186 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 TMEM18Q96B42 140 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 PRPF18Q99633 342 aaKnown RBP3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 LHPPQ9H008 270 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 PCDHAC2Q9Y5I4 1007 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 NFS1Q9Y697 457 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 RIMBP3CA6NJZ7 1639 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 RIMBP3BA6NNM3 1639 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 RIMBP3Q9UFD9 1639 aa3.4□□□□□ -1.87
HMGB1P31-201ENST00000437242 DCAF1Q9Y4B6 1507 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 A0A0U1RQJ8 604 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 DYTNA2CJ06 578 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 PIP5K1BO14986 540 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 XPNPEP2O43895 674 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 PAK4O96013 591 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 AFPP02771 609 aaKnown RBP3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 FCGR2AP12318 317 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 CKMT1AP12532 417 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 VEGFCP49767 419 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 CRIP2P52943 208 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 DLG1Q12959 904 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 CCDC6Q16204 474 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 GXYLT1Q4G148 440 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 XKR9Q5GH70 373 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 KIAA1324Q6UXG2 1013 aaKnown RBP3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 RNF144BQ7Z419 303 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 PATL1Q86TB9 770 aaKnown RBP3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 DPP9Q86TI2 863 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 WDR5BQ86VZ2 330 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 VPS52Q8N1B4 723 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 ANKRD44Q8N8A2 993 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 TEX45Q8NA69 505 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 CD101Q93033 1021 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 NPAS1Q99742 590 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms