RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MSLNQ13421 630 aaPredicted RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 IFNL1Q8IU54 200 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 ZHX1-C8orf76Q96EF9 292 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 ASB8Q9H765 288 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 DNAJC16Q9Y2G8 782 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 ARHGEF5Q12774 1597 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 SERPINA1P01009 418 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 LTFP02788 710 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 NOS2P35228 1153 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 KCNJ1P48048 391 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 PFKPQ01813 784 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 EPHA10Q5JZY3 1008 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 PLEKHA7Q6IQ23 1121 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 ZDHHC13Q8IUH4 622 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 MAGEB18Q96M61 343 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 ACE2Q9BYF1 805 aaPredicted RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 TIMM13Q9Y5L4 95 aaPredicted RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 TLX3O43711 291 aaPredicted RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 BCL10O95999 233 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 HSD3B2P26439 372 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 FMO4P31512 558 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 TRAF3Q13114 568 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 FASTKQ14296 549 aaKnown RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 SNX20Q7Z614 316 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 MYLPFQ96A32 169 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 SEPHS2Q99611 448 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 ZSWIM1Q9BR11 485 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 VPS4AQ9UN37 437 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 PLEKP08567 350 aaPredicted RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 VARSP26640 1264 aaKnown RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 NEK3P51956 506 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 CDC42P60953 191 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 STXBP1P61764 594 aaKnown RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 NKAPQ8N5F7 415 aaKnown RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 MAGEE2Q8TD90 523 aaPredicted RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 RIPOR3Q96MK2 946 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 RABGEF1Q9UJ41 708 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 PSMD13Q9UNM6 376 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 PCDHA11Q9Y5I1 949 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 NRKQ7Z2Y5 1582 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 GATBO75879 557 aaKnown RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 TOP3BO95985 862 aaKnown RBP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 GZMAP12544 262 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 YBX3P16989 372 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCN4A-201ENST00000435607 PGAM1P18669 254 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 CPA2P48052 419 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 DNAJC3Q13217 504 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 FBXO33Q7Z6M2 555 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 RASAL3Q86YV0 1011 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 HPS6Q86YV9 775 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 C4orf19Q8IY42 314 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 ITFG1Q8TB96 612 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 TSPAN16Q9UKR8 245 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 NRCAMQ92823 1304 aa11.33□□□□□ -0.6
SCN4A-201ENST00000435607 ABHD14A-ACY1A0A1B0GW23 586 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 FAM92AA1XBS5 289 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 PGM3O95394 542 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CXCL14O95715 111 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 FAUP35544 74 aaKnown RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 SLC29A2Q14542 456 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ZCWPW2Q504Y3 356 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 MPPE1Q53F39 396 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TTC29Q8NA56 475 aaPredicted RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TPCN2Q8NHX9 752 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CELF6Q96J87 481 aaKnown RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 SLC24A2Q9UI40 661 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 KLHL41O60662 606 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CXCL8P10145 99 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ACAT1P24752 427 aaKnown RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 GP5P40197 560 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TAS2R50P59544 299 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 RTL4Q6ZR62 310 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 GPC2Q8N158 579 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 SPATA20Q8TB22 786 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 SLC4A5Q9BY07 1137 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 AGO4Q9HCK5 861 aaKnown RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TCF7L2Q9NQB0 619 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 PHPT1Q9NRX4 125 aaPredicted RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 SEMA3GQ9NS98 782 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 NOX1Q9Y5S8 564 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 A0A1B0GTH6 734 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CLDN4O14493 209 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 FKBP6O75344 327 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 MAP3K6O95382 1288 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 GLUD1P00367 558 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CYP17A1P05093 508 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 UBTFL6P0CB48 400 aaPredicted RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 PPATQ06203 517 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 DMPKQ09013 629 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 DGUOKQ16854 277 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ATP13A5Q4VNC0 1218 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 RASGRP2Q7LDG7 609 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TAF8Q7Z7C8 310 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 USP38Q8NB14 1042 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 GMCL1P1Q8NEA9 526 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TMEM79Q9BSE2 394 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 MTRRQ9UBK8 725 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 COPS7AQ9UBW8 275 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms