RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ATP9BO43861 1147 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 USP12O75317 370 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 ALDOAP04075 364 aaKnown RBP13.05□□□□□ -0.32
DDX56-204ENST00000431640 RHOQP17081 205 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 FGFR3P22607 806 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 POLD2P49005 469 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 SERPINB8P50452 374 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 KPNA1P52294 538 aaPredicted RBP13.05□□□□□ -0.32
DDX56-204ENST00000431640 LIMK2P53671 638 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 ZBTB16Q05516 673 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 BST1Q10588 318 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 PDE1CQ14123 709 aaPredicted RBP13.05□□□□□ -0.32
DDX56-204ENST00000431640 BTG3Q14201 252 aaPredicted RBP13.05□□□□□ -0.32
DDX56-204ENST00000431640 DDR2Q16832 855 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 CERCAMQ5T4B2 595 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 POTEHQ6S545 545 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 TAS1R1Q7RTX1 841 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 STRA8Q7Z7C7 330 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 MTDHQ86UE4 582 aaKnown RBP13.05□□□□□ -0.32
DDX56-204ENST00000431640 RNF168Q8IYW5 571 aaPredicted RBP13.05□□□□□ -0.32
DDX56-204ENST00000431640 UMODL1-AS1Q8N2C9 162 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 RFWD2Q8NHY2 731 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 PPP1R14CQ8TAE6 165 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 SPATA17Q96L03 361 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 TBL1YQ9BQ87 522 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 TMEM175Q9BSA9 504 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 TMEM120AQ9BXJ8 343 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 LRMDAQ9H2I8 198 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 FAM96AQ9H5X1 160 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 KCNK13Q9HB14 408 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 MRM3Q9HC36 420 aaKnown RBP13.05□□□□□ -0.32
DDX56-204ENST00000431640 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
DDX56-204ENST00000431640 HEY2Q9UBP5 337 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 ATG2AQ2TAZ0 1938 aa13.05□□□□□ -0.32
DDX56-204ENST00000431640 MSI1O43347 362 aaKnown RBP13.04□□□□□ -0.32
DDX56-204ENST00000431640 PLIN3O60664 434 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 SNNO75324 88 aaPredicted RBP13.04□□□□□ -0.32
DDX56-204ENST00000431640 GRK2P25098 689 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 DNAJB1P25685 340 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 SLC8A1P32418 973 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 MAGEA12P43365 314 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 RENBPP51606 427 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 RPL10AP62906 217 aaKnown RBP13.04□□□□□ -0.32
DDX56-204ENST00000431640 OCRLQ01968 901 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 GPR17Q13304 367 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 TRIP4Q15650 581 aaPredicted RBP13.04□□□□□ -0.32
DDX56-204ENST00000431640 UGP2Q16851 508 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 FASTKD1Q53R41 847 aaKnown RBP13.04□□□□□ -0.32
DDX56-204ENST00000431640 TAF1BQ53T94 588 aaPredicted RBP13.04□□□□□ -0.32
DDX56-204ENST00000431640 N4BP2L1Q5TBK1 243 aaPredicted RBP13.04□□□□□ -0.32
DDX56-204ENST00000431640 PKN3Q6P5Z2 889 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 CES3Q6UWW8 571 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 OTOP3Q7RTS5 596 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 CLNKQ7Z7G1 428 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 LCA5Q86VQ0 697 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 KCNMB4Q86W47 210 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 CEP57Q86XR8 500 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 SREK1Q8WXA9 508 aaKnown RBP13.04□□□□□ -0.32
DDX56-204ENST00000431640 BTN2A3PQ96KV6 586 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 CEP295NLQ96MC4 621 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 ZYG11BQ9C0D3 744 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 C20orf96Q9NUD7 363 aaPredicted RBP13.04□□□□□ -0.32
DDX56-204ENST00000431640 RBM22Q9NW64 420 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX56-204ENST00000431640 LNPEPQ9UIQ6 1025 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 PSAT1Q9Y617 370 aa13.04□□□□□ -0.32
DDX56-204ENST00000431640 HGSO14964 777 aaPredicted RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 ATP6V1G2O95670 118 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 PTPN4P29074 926 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 PAPOLAP51003 745 aaKnown RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 MNAT1P51948 309 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 KCNJ2P63252 427 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 MPP3Q13368 585 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 HNRNPDQ14103 355 aaKnown RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 KRT72Q14CN4 511 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 HSP90AA5PQ58FG0 334 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 FAM91A1Q658Y4 838 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 FUT10Q6P4F1 479 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 SLC39A11Q8N1S5 342 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 PPHLN1Q8NEY8 458 aaKnown RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 GABPB2Q8TAK5 448 aaPredicted RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 USP33Q8TEY7 942 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 NSMCE1Q8WV22 266 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 FBXO32Q969P5 355 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 NSL1Q96IY1 281 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 WWP1Q9H0M0 922 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 RETREG1Q9H6L5 497 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 CHRAC1Q9NRG0 131 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 TMEM248Q9NWD8 314 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 OSER1Q9NX31 292 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 IPO11Q9UI26 975 aaKnown RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 MID2Q9UJV3 735 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 NUP205Q92621 2012 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 CCDC22O60826 627 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 HAUS5O94927 633 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 MOCS2O96007 188 aaPredicted RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 APOA4P06727 396 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 T-ENOLP0DO92 83 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 MYL2P10916 166 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 TPH1P17752 444 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 PAMP19021 973 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms