RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 IRF7Q92985 503 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 GDAP1L1Q96MZ0 367 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 AGAP3Q96P47 875 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 PPP1R2P1Q96PQ5 205 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 TXLNGYQ9BZA5 131 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 MUC3BQ9H195 1237 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 PDFQ9HBH1 243 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 EIF2B3Q9NR50 452 aaKnown RBP18.58■□□□□ 0.56
HMGN1-206ENST00000431390 FAM86C1Q9NVL1 165 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 ZNF446Q9NWS9 450 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 MARK1Q9P0L2 795 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 RSPH14Q9UHP6 348 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 KIF26AQ9ULI4 1882 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-206ENST00000431390 HPCAL4Q9UM19 191 aa18.58■□□□□ 0.56
HMGN1-206ENST00000431390 DOCK8Q8NF50 2099 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 TCRBV7S3A2A0A539 114 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 CACNG3O60359 315 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 TMEM63AO94886 807 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 PSMB4P28070 264 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 CD68P34810 354 aaPredicted RBP18.57■□□□□ 0.56
HMGN1-206ENST00000431390 IFNAR2P48551 515 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 DHX9Q08211 1270 aaKnown RBP18.57■□□□□ 0.56
HMGN1-206ENST00000431390 FSCBQ5H9T9 825 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 SPDYCQ5MJ68 293 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 FAM182AQ5T1J6 154 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 FAXCQ5TGI0 409 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 TMCO4Q5TGY1 634 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 MARC1Q5VT66 337 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 MCUQ8NE86 351 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 OSCP1Q8WVF1 389 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 SUSD6Q92537 303 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 E2F7Q96AV8 911 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 RSPRY1Q96DX4 576 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 ASIC4Q96FT7 647 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 ATP13A1Q9HD20 1204 aa18.57■□□□□ 0.56
HMGN1-206ENST00000431390 RBM22Q9NW64 420 aaKnown RBP eCLIP18.57■□□□□ 0.563e-6■■□□□ 13.5
HMGN1-206ENST00000431390 USP34Q70CQ2 3546 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 E7EVH7 732 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 NEBLO76041 1014 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 APRTP07741 180 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 NFKB1P19838 968 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 VIPR2P41587 438 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 CBLBQ13191 982 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 RFTN1Q14699 578 aaPredicted RBP18.56■□□□□ 0.56
HMGN1-206ENST00000431390 CASP8Q14790 479 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 TMEM25Q86YD3 366 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 RELL1Q8IUW5 271 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 KLHDC8BQ8IXV7 354 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 ADGRG2Q8IZP9 1017 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 WFDC5Q8TCV5 224 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 USP33Q8TEY7 942 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 ALG14Q96F25 216 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 LRRC3BQ96PB8 259 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 FEM1AQ9BSK4 669 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 SPON2Q9BUD6 331 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 FUT8Q9BYC5 575 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 LINC00597Q9H2U6 94 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 GLOD4Q9HC38 313 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 KIAA1522Q9P206 1035 aaPredicted RBP18.56■□□□□ 0.56
HMGN1-206ENST00000431390 ATP8A1Q9Y2Q0 1164 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 OR51B4Q9Y5P0 310 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 WNT6Q9Y6F9 365 aa18.56■□□□□ 0.56
HMGN1-206ENST00000431390 ERI2A8K979 691 aaKnown RBP18.55■□□□□ 0.56
HMGN1-206ENST00000431390 EIF3HO15372 352 aaKnown RBP eCLIP18.55■□□□□ 0.56
HMGN1-206ENST00000431390 HLA-DQB2P05538 268 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 FCARP24071 287 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 MMP13P45452 471 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 ARL4CP56559 192 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 SLC12A1Q13621 1099 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 PRPSAP1Q14558 356 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 LBRQ14739 615 aaKnown RBP18.55■□□□□ 0.56
HMGN1-206ENST00000431390 BHMTQ93088 406 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 ZNF419Q96HQ0 510 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-206ENST00000431390 FCRL5Q96RD9 977 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 HAUS2Q9NVX0 235 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 DUS2Q9NX74 493 aaKnown RBP18.55■□□□□ 0.56
HMGN1-206ENST00000431390 PLK2Q9NYY3 685 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 MYOFQ9NZM1 2061 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 GOLGA6CA6NDK9 693 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 GOLGA6BA6NDN3 693 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 HEPACAM2A8MVW5 462 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 GOLGA6DP0CG33 693 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 SP100P23497 879 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-206ENST00000431390 MZF1P28698 734 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-206ENST00000431390 CSKP41240 450 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 LMAN1P49257 510 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 PMS2P54278 862 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 SARNPP82979 210 aaKnown RBP18.55■□□□□ 0.56
HMGN1-206ENST00000431390 SLC10A7Q0GE19 358 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 HIF1AQ16665 826 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 CENPUQ71F23 418 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 CCDC25Q86WR0 208 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 BBS5Q8N3I7 341 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 DCAF4L2Q8NA75 395 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 NECTIN4Q96NY8 510 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 RBM15Q96T37 977 aaKnown RBP eCLIP18.55■□□□□ 0.56
HMGN1-206ENST00000431390 GORASP1Q9BQQ3 440 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 BBS2Q9BXC9 721 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 VIPAS39Q9H9C1 493 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 ZFP14Q9HCL3 533 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms