RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 RPA3P35244 121 aaPredicted RBP15.59■□□□□ 0.09
PTPRF-206ENST00000429895 DPYSL3Q14195 570 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 CLEC4MQ9H2X3 399 aaPredicted RBP15.59■□□□□ 0.09
PTPRF-206ENST00000429895 DDX4Q9NQI0 724 aaKnown RBP15.59■□□□□ 0.09
PTPRF-206ENST00000429895 TOR4AQ9NXH8 423 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 SLC12A4Q9UP95 1085 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 SPATA31D3P0C874 917 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 SMIM10L2AP0DMW4 78 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 SMIM10L2BP0DMW5 78 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 PRLRP16471 622 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 FAAH2Q6GMR7 532 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 SPATA31D4Q6ZUB0 917 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 APBB2Q92870 758 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 NDNQ99608 321 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 C2orf49Q9BVC5 232 aaPredicted RBP15.59■□□□□ 0.09
PTPRF-206ENST00000429895 ETNK2Q9NVF9 386 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 CTPS1P17812 591 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 WDR59Q6PJI9 974 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 PCDH20Q8N6Y1 951 aaKnown RBP15.59■□□□□ 0.09
PTPRF-206ENST00000429895 RORBQ92753 470 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 MTMR8Q96EF0 704 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 ZNF232Q9UNY5 417 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 TMEM191CA6NGB0 347 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 IL6P05231 212 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 ANXA5P08758 320 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 RHAGQ02094 409 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 AADACL2Q6P093 401 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 CNSTQ6PJW8 725 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 FAM183BPQ6ZVS7 135 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 ZFPM1Q8IX07 1006 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 CENPIQ92674 756 aaPredicted RBP15.58■□□□□ 0.09
PTPRF-206ENST00000429895 EFCAB10A6NFE3 127 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 RXRGP48443 463 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 KRT73Q86Y46 540 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 KIAA0319LQ8IZA0 1049 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 STK40Q8N2I9 435 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 ZNF276Q8N554 614 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 RERGQ96A58 199 aaPredicted RBP15.58■□□□□ 0.09
PTPRF-206ENST00000429895 QRFPRQ96P65 431 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 TMPRSS4Q9NRS4 437 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 DMGDHQ9UI17 866 aaKnown RBP15.58■□□□□ 0.09
PTPRF-206ENST00000429895 VAV3Q9UKW4 847 aa15.58■□□□□ 0.09
PTPRF-206ENST00000429895 PIGNO95427 931 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 LRPAP1P30533 357 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 RPL4P36578 427 aaKnown RBP15.58■□□□□ 0.08
PTPRF-206ENST00000429895 PIK3CGP48736 1102 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 DLG4P78352 724 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 EARS2Q5JPH6 523 aaKnown RBP15.58■□□□□ 0.08
PTPRF-206ENST00000429895 PACS1Q6VY07 963 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 SAPCD2Q86UD0 394 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 ENKURQ8TC29 256 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 PURBQ96QR8 312 aaKnown RBP15.58■□□□□ 0.08
PTPRF-206ENST00000429895 REEP1Q9H902 201 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 CLK3P49761 638 aaKnown RBP15.58■□□□□ 0.08
PTPRF-206ENST00000429895 ZPBP2Q6X784 338 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 NAT16Q8N8M0 369 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 ZBTB10Q96DT7 871 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 BTBD10Q9BSF8 475 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 GRIP2Q9C0E4 1043 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 ISM1B1AKI9 464 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 C1QTNF3-AMACRE9PGA6 284 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 H0Y858 1186 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 SLC9A3R1O14745 358 aaPredicted RBP15.58■□□□□ 0.08
PTPRF-206ENST00000429895 TSPAN8P19075 237 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 NDUFV1P49821 464 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 MRPS6P82932 125 aaKnown RBP15.58■□□□□ 0.08
PTPRF-206ENST00000429895 TCEAL5Q5H9L2 206 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 FIGNQ5HY92 759 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 PROSER1Q86XN7 944 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 FIBCD1Q8N539 461 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 DGCR6LQ9BY27 220 aa15.58■□□□□ 0.08
PTPRF-206ENST00000429895 CCDC85CA6NKD9 419 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 C21orf59P57076 290 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 MYBPC2Q14324 1141 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 CEP68Q76N32 757 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 STARD8Q92502 1023 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 WNT8BQ93098 351 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 EXOC2Q96KP1 924 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 OXCT2Q9BYC2 517 aaPredicted RBP15.57■□□□□ 0.08
PTPRF-206ENST00000429895 ZFP14Q9HCL3 533 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 CELF3Q5SZQ8 465 aaKnown RBP15.57■□□□□ 0.08
PTPRF-206ENST00000429895 ARMC8Q8IUR7 673 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 RMND5BQ96G75 393 aaPredicted RBP15.57■□□□□ 0.08
PTPRF-206ENST00000429895 POLR1BQ9H9Y6 1135 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 HPSEQ9Y251 543 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 TPRKBQ9Y3C4 175 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 GMFGO60234 142 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 ANXA6P08133 673 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 PIRTP0C851 137 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 OAZ1P54368 228 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 IFI35P80217 286 aaPredicted RBP15.57■□□□□ 0.08
PTPRF-206ENST00000429895 GALNT3Q14435 633 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 PARP6Q2NL67 630 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 TRMT5Q32P41 509 aaKnown RBP15.57■□□□□ 0.08
PTPRF-206ENST00000429895 WDR93Q6P2C0 686 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 FAM171BQ6P995 826 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 MYLPFQ96A32 169 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.57■□□□□ 0.085e-9■■□□□ 13.6
PTPRF-206ENST00000429895 RABGEF1Q9UJ41 708 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms