RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ACTR3P61158 418 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PLIN5Q00G26 463 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 DLG1Q12959 904 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 KLF10Q13118 480 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 CYLC2Q14093 348 aaPredicted RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 FAM72AQ5TYM5 149 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 C9orf57Q5W0N0 161 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 CES4AQ5XG92 561 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 FAM72DQ6L9T8 149 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 GPR142Q7Z601 462 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 TFAP2DQ7Z6R9 452 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PLEKHH3Q7Z736 793 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 FAM72BQ86X60 149 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 BHLHE22Q8NFJ8 381 aaPredicted RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 SLC35F5Q8WV83 523 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PPP2R3CQ969Q6 453 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 EMID1Q96A84 441 aaPredicted RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 ZNF778Q96MU6 729 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 DHRS4Q9BTZ2 278 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 GRIP2Q9C0E4 1043 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 SIRPGQ9P1W8 387 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PDP2Q9P2J9 529 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 EPS15L1Q9UBC2 864 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 FETUBQ9UGM5 382 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 ZNF180Q9UJW8 692 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 CDYLQ9Y232 598 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 POMPQ9Y244 141 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 SNX13Q9Y5W8 968 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PRRC2BQ5JSZ5 2229 aaKnown RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 SZT2Q5T011 3432 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 FAM159BA6NKW6 160 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 GOLGA8CPA6NN73 597 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 ABLIM1O14639 778 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 MDM4O15151 490 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 BEST1O76090 585 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PFKMP08237 780 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 DHRS4L1P0CG22 281 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 TSHRP16473 764 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PMLP29590 882 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 ACADSBP45954 432 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 ENPEPQ07075 957 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 GRM3Q14832 879 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PCLAFQ15004 111 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 SFT2D3Q587I9 215 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 FBXO48Q5FWF7 155 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 BNC2Q6ZN30 1099 aaPredicted RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 ARCQ7LC44 396 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 LDB1Q86U70 411 aaPredicted RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 ZBTB46Q86UZ6 589 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 DENND6AQ8IWF6 608 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 ANKRD27Q96NW4 1050 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 QKIQ96PU8 341 aaKnown RBP eCLIP8.19□□□□□ -1.1
HPS4-205ENST00000429411 GATA5Q9BWX5 397 aaPredicted RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 CAAP1Q9H8G2 361 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 XPR1Q9UBH6 696 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 NOD1Q9Y239 953 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PRUNE2Q8WUY3 3088 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 COL2A1P02458 1487 aaPredicted RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 TRIP11Q15643 1979 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 GREB1LQ9C091 1923 aaPredicted RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 SMIM28A0A1B0GU29 152 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 YJEFN3A6XGL0 299 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 TRAFD1O14545 582 aaPredicted RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 TSPAN3O60637 253 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 MAGEC1O60732 1142 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 GCATO75600 419 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 B3GAT3O94766 335 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 POMCP01189 267 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 INHAP05111 366 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 FGF3P11487 239 aaPredicted RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 NMBRP28336 390 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 TKTP29401 623 aaKnown RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 MPP1Q00013 466 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PDAP1Q13442 181 aaKnown RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 TMED1Q13445 227 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 ARL13AQ5H913 290 aaPredicted RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 MBLAC2Q68D91 279 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 SLC9A4Q6AI14 798 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 ZNF470Q6ECI4 717 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 ITPRIPL1Q6GPH6 555 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PSTKQ8IV42 348 aaKnown RBP8.19□□□□□ -1.1
HPS4-205ENST00000429411 DDIASQ8IXT1 998 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 ZNF276Q8N554 614 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 ATPAF2Q8N5M1 289 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 KYQ8NBH2 561 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 WNT8BQ93098 351 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 GAD1Q99259 594 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 PIGVQ9NUD9 493 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 OR12D3Q9UGF7 316 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 ADAMTS5Q9UNA0 930 aa8.19□□□□□ -1.1
HPS4-205ENST00000429411 UBA6A0AVT1 1052 aaPredicted RBP8.18□□□□□ -1.1
HPS4-205ENST00000429411 SPTLC1O15269 473 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 SUPT7LO94864 414 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 CD4P01730 458 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 SYN1P17600 705 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 PTPN1P18031 435 aaKnown RBP8.18□□□□□ -1.1
HPS4-205ENST00000429411 CNTFP26441 200 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 CTGFP29279 349 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 MAXP61244 160 aa8.18□□□□□ -1.1
HPS4-205ENST00000429411 DCAF4L1Q3SXM0 396 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms