RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 AGMOQ6ZNB7 445 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 PLPPR4Q7Z2D5 763 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 ADGRA1Q86SQ6 560 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 CAMK1DQ8IU85 385 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 ADAM2Q99965 735 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 BLOC1S4Q9NUP1 217 aa12.96□□□□□ -0.33
LDB3-205ENST00000429277 ITSN1Q15811 1721 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 LRRC14BA6NHZ5 514 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 BIKQ13323 160 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 DACT2Q5SW24 774 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 ZNF621Q6ZSS3 439 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 C3orf67Q6ZVT6 689 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 HEXDCQ8WVB3 486 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 TPD52L3Q96J77 140 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 Q96MT0 163 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 MTMR9Q96QG7 549 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 OXCT2Q9BYC2 517 aaPredicted RBP12.96□□□□□ -0.34
LDB3-205ENST00000429277 KLHL31Q9H511 634 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 PCDHA11Q9Y5I1 949 aa12.96□□□□□ -0.34
LDB3-205ENST00000429277 ERN1O75460 977 aaKnown RBP12.95□□□□□ -0.34
LDB3-205ENST00000429277 TRUB2O95900 331 aaKnown RBP12.95□□□□□ -0.34
LDB3-205ENST00000429277 ENO2P09104 434 aaPredicted RBP12.95□□□□□ -0.34
LDB3-205ENST00000429277 USP17L7P0C7H9 530 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 WARSP23381 471 aaKnown RBP12.95□□□□□ -0.34
LDB3-205ENST00000429277 HOXA10P31260 410 aaPredicted RBP12.95□□□□□ -0.34
LDB3-205ENST00000429277 CDC42P60953 191 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 SMARCB1Q12824 385 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 NDUFA5Q16718 116 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 CES5AQ6NT32 575 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 C1orf186Q6ZWK4 172 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 VSIG10LQ86VR7 867 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 HELQQ8TDG4 1101 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 TEKT5Q96M29 485 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 PRDM8Q9NQV8 689 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 CYP3A7-CYP3A51PA0A087WV96 503 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 CYP3A7P24462 503 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 CACNA2D1P54289 1103 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 SOX10P56693 466 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 MZT2AQ6P582 158 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 TRAPPC5Q8IUR0 188 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 PHC3Q8NDX5 983 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 OR52L1Q8NGH7 329 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 SELENOMQ8WWX9 145 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 ZYG11BQ9C0D3 744 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 PCYOX1Q9UHG3 505 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 LEF1Q9UJU2 399 aaPredicted RBP12.95□□□□□ -0.34
LDB3-205ENST00000429277 STON1Q9Y6Q2 735 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 PIGNO95427 931 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 CTSEP14091 401 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 FLT3P36888 993 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 TRAF3Q13114 568 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 OTUD3Q5T2D3 398 aaPredicted RBP12.95□□□□□ -0.34
LDB3-205ENST00000429277 FAM20CQ8IXL6 584 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 COLGALT2Q8IYK4 626 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 SPATA20Q8TB22 786 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 EPS8L1Q8TE68 723 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 MIEF2Q96C03 454 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 FAM192AQ9GZU8 254 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 MAF1Q9H063 256 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 NDOR1Q9UHB4 597 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 ZNF510Q9Y2H8 683 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 MFHAS1Q9Y4C4 1052 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 NR2E3Q9Y5X4 410 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 H3BQF6 201 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 SLC28A1O00337 649 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 TEX28O15482 410 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 GCATO75600 419 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 NUDT14O95848 222 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 ASGR1P07306 291 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 ATP4AP20648 1035 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 ATP6V0D1P61421 351 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 IRGCQ6NXR0 463 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 PIWIL4Q7Z3Z4 852 aaKnown RBP12.95□□□□□ -0.34
LDB3-205ENST00000429277 ADAMTSL2Q86TH1 951 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 HJURPQ8NCD3 748 aaPredicted RBP12.95□□□□□ -0.34
LDB3-205ENST00000429277 PIWIL2Q8TC59 973 aaKnown RBP12.95□□□□□ -0.34
LDB3-205ENST00000429277 ANGPT4Q9Y264 503 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 CLUHO75153 1309 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 IL6P05231 212 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 PPM1AP35813 382 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 MAPK9P45984 424 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 RD3Q7Z3Z2 195 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 CACTIN-AS1Q8N1I8 211 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 NACC2Q96BF6 587 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 DNAJC1Q96KC8 554 aaKnown RBP12.95□□□□□ -0.34
LDB3-205ENST00000429277 PGLYRP2Q96PD5 576 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 TINF2Q9BSI4 451 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 RERGLQ9H628 205 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 KCNMB3Q9NPA1 279 aa12.95□□□□□ -0.34
LDB3-205ENST00000429277 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.95□□□□□ -0.34
LDB3-205ENST00000429277 NCANO14594 1321 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 EFCAB10A6NFE3 127 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 TMEM191CA6NGB0 347 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 UBA1P22314 1058 aaKnown RBP12.94□□□□□ -0.34
LDB3-205ENST00000429277 FAM46CQ5VWP2 391 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 C8orf59Q8N0T1 100 aaPredicted RBP12.94□□□□□ -0.34
LDB3-205ENST00000429277 ENKURQ8TC29 256 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 CDRT15Q96T59 188 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 MAFO75444 373 aaPredicted RBP12.94□□□□□ -0.34
LDB3-205ENST00000429277 FGF19O95750 216 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms