RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 CHRNB2P17787 502 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 SOX5P35711 763 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 SERPINH1P50454 418 aaKnown RBP17.45■□□□□ 0.38
TRIM39-209ENST00000428728 DNA2P51530 1060 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 CDR2Q01850 454 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 SMAD1Q15797 465 aaKnown RBP17.45■□□□□ 0.38
TRIM39-209ENST00000428728 ARSIQ5FYB1 569 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 FKBP15Q5T1M5 1219 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 C19orf48Q6RUI8 117 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 DPY19L3Q6ZPD9 716 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 IQCHQ86VS3 1027 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 TMIEQ8NEW7 156 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 SLC30A5Q8TAD4 765 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 ERVMER34-1Q9H9K5 563 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 TMEM51Q9NW97 253 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 ZNF212Q9UDV6 495 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 RAXQ9Y2V3 346 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 FREM2Q5SZK8 3169 aa17.45■□□□□ 0.38
TRIM39-209ENST00000428728 TRABD2BA6NFA1 517 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 LEFTY1O75610 366 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 RFPL3O75679 317 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 PCDH8O95206 1070 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 CYP1A1P04798 512 aaPredicted RBP17.44■□□□□ 0.38
TRIM39-209ENST00000428728 MMP8P22894 467 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 RXRGP48443 463 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 ACADVLP49748 655 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 JAM2P57087 298 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 ARF5P84085 180 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 GNA12Q03113 381 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 CYP4F3Q08477 520 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 OVGP1Q12889 678 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 SFMBT2Q5VUG0 894 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 RETSATQ6NUM9 610 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 ARCQ7LC44 396 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 KANSL1Q7Z3B3 1105 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 JOSD2Q8TAC2 188 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 GPT2Q8TD30 523 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 RXFP2Q8WXD0 754 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 KLHDC7BQ96G42 594 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 PPP1R16AQ96I34 528 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 PCMTD1Q96MG8 357 aaPredicted RBP17.44■□□□□ 0.38
TRIM39-209ENST00000428728 FCF1Q9Y324 198 aaKnown RBP17.44■□□□□ 0.38
TRIM39-209ENST00000428728 GPSM3Q9Y4H4 160 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 ACTL7AQ9Y615 435 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 ANKRD36A6QL64 1941 aa17.44■□□□□ 0.38
TRIM39-209ENST00000428728 ANKRD11Q6UB99 2663 aaPredicted RBP17.44■□□□□ 0.38
TRIM39-209ENST00000428728 LRRK1Q38SD2 2015 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 ZMPSTE24O75844 475 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 THEGLP0DJG4 465 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 SDC4P31431 198 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 AKT2P31751 481 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 ACVRL1P37023 503 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 ANP32AP39687 249 aaKnown RBP17.43■□□□□ 0.38
TRIM39-209ENST00000428728 CCDC15Q0P6D6 951 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 CAMK2BQ13554 666 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 SYCP1Q15431 976 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 ZNF284Q2VY69 593 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 ARL13BQ3SXY8 428 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 SEL1L3Q68CR1 1132 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 RWDD4Q6NW29 188 aaKnown RBP17.43■□□□□ 0.38
TRIM39-209ENST00000428728 ZNF783Q6ZMS7 281 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 ERN2Q76MJ5 926 aaKnown RBP17.43■□□□□ 0.38
TRIM39-209ENST00000428728 HORMAD1Q86X24 394 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 PCDH20Q8N6Y1 951 aaKnown RBP17.43■□□□□ 0.38
TRIM39-209ENST00000428728 TMEM145Q8NBT3 493 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 CALN1Q9BXU9 219 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 TM6SF2Q9BZW4 377 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 ZDHHC6Q9H6R6 413 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 NDFIP2Q9NV92 336 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 FANCLQ9NW38 375 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 PPARGC1AQ9UBK2 798 aaKnown RBP17.43■□□□□ 0.38
TRIM39-209ENST00000428728 ZFR2Q9UPR6 939 aaKnown RBP17.43■□□□□ 0.38
TRIM39-209ENST00000428728 SIK3Q9Y2K2 1263 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 PCDHGA1Q9Y5H4 931 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 WASF2Q9Y6W5 498 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 CACNA1GO43497 2377 aa17.43■□□□□ 0.38
TRIM39-209ENST00000428728 KNTC1P50748 2209 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 C2CD4BA6NLJ0 364 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 ZNF821O75541 412 aaPredicted RBP17.42■□□□□ 0.38
TRIM39-209ENST00000428728 HNRNPA2B1P22626 353 aaKnown RBP17.42■□□□□ 0.38
TRIM39-209ENST00000428728 HNF1BP35680 557 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 STAT1P42224 750 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 CCNHP51946 323 aaPredicted RBP17.42■□□□□ 0.38
TRIM39-209ENST00000428728 NEK3P51956 506 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 COPB1P53618 953 aaKnown RBP17.42■□□□□ 0.38
TRIM39-209ENST00000428728 CLDN2P57739 230 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 COL28A1Q2UY09 1125 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 CCDC14Q49A88 953 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 MANEALQ5VSG8 457 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 TRIM72Q6ZMU5 477 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 OR13H1Q8NG92 308 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 MAGEB5Q9BZ81 275 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 CEP44Q9C0F1 390 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 SEPT11Q9NVA2 429 aaKnown RBP17.42■□□□□ 0.38
TRIM39-209ENST00000428728 OR12D3Q9UGF7 316 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 DNAI1Q9UI46 699 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 ZFYVE26Q68DK2 2539 aa17.42■□□□□ 0.38
TRIM39-209ENST00000428728 FAM72CH0Y354 149 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 ADRB3P13945 408 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 HOXB3P14651 431 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms