RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 UBA3Q8TBC4 463 aa11.78□□□□□ -0.52
DDX39B-209ENST00000428450 CLEC4CQ8WTT0 213 aa11.78□□□□□ -0.52
DDX39B-209ENST00000428450 BTN2A2Q8WVV5 523 aa11.78□□□□□ -0.52
DDX39B-209ENST00000428450 IRGQQ8WZA9 623 aa11.78□□□□□ -0.52
DDX39B-209ENST00000428450 CCDC74AQ96AQ1 378 aa11.78□□□□□ -0.52
DDX39B-209ENST00000428450 FAXDC2Q96IV6 333 aa11.78□□□□□ -0.52
DDX39B-209ENST00000428450 TMEM74Q96NL1 305 aa11.78□□□□□ -0.52
DDX39B-209ENST00000428450 LRRC61Q9BV99 259 aa11.78□□□□□ -0.52
DDX39B-209ENST00000428450 SRRTQ9BXP5 876 aaKnown RBP11.78□□□□□ -0.52
DDX39B-209ENST00000428450 KCTD10Q9H3F6 313 aa11.78□□□□□ -0.52
DDX39B-209ENST00000428450 IPO11Q9UI26 975 aaKnown RBP11.78□□□□□ -0.52
DDX39B-209ENST00000428450 OTOGQ6ZRI0 2925 aa11.78□□□□□ -0.52
DDX39B-209ENST00000428450 KPNA3O00505 521 aaPredicted RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 BNIP3LO60238 219 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 MOCS2O96007 188 aaPredicted RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 LTFP02788 710 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 NR3C1P04150 777 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 RPLP0P05388 317 aaKnown RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 TRIM49P0CI25 452 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 TRIM49CP0CI26 452 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 CD82P27701 267 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 CHRNA3P32297 505 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 PFN3P60673 137 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 CCDC15Q0P6D6 951 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 NNTQ13423 1086 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 ESRP1Q6NXG1 681 aaKnown RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 ERN2Q76MJ5 926 aaKnown RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 CIR1Q86X95 450 aaPredicted RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 CCAR2Q8N163 923 aaKnown RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 TTC39CQ8N584 583 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 SH2D3CQ8N5H7 860 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 OR2A12Q8NGT7 310 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 C9orf43Q8TAL5 461 aaPredicted RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 DQX1Q8TE96 717 aaKnown RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 JPH3Q8WXH2 748 aaPredicted RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 SEMA4DQ92854 862 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 TBATAQ96M53 351 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 LENG8Q96PV6 779 aaPredicted RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 HDAC8Q9BY41 377 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 BLZF1Q9H2G9 400 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 TMPRSS4Q9NRS4 437 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 APOBEC3BQ9UH17 382 aaKnown RBP11.77□□□□□ -0.53
DDX39B-209ENST00000428450 SMC3Q9UQE7 1217 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 OR51B4Q9Y5P0 310 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 SDK2Q58EX2 2172 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 MED13Q9UHV7 2174 aa11.77□□□□□ -0.53
DDX39B-209ENST00000428450 PVALEFA0A1B0GWK0 134 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 AGRPO00253 132 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 PIK3R2O00459 728 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 EIF5BO60841 1220 aaKnown RBP11.76□□□□□ -0.53
DDX39B-209ENST00000428450 CD2BP2O95400 341 aaKnown RBP11.76□□□□□ -0.53
DDX39B-209ENST00000428450 MT-CO1P00395 513 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 ANXA6P08133 673 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 CELA2BP08218 269 aaPredicted RBP11.76□□□□□ -0.53
DDX39B-209ENST00000428450 RNF224P0DH78 156 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 TSHRP16473 764 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 NOS2P35228 1153 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 ARSDP51689 593 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 RPS21P63220 83 aaKnown RBP11.76□□□□□ -0.53
DDX39B-209ENST00000428450 STK4Q13043 487 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 CEP135Q66GS9 1140 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 PMF1Q6P1K2 205 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 ATCAYQ86WG3 371 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 PHACTR4Q8IZ21 702 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 ARL10Q8N8L6 244 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 SLC35F5Q8WV83 523 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 NKD1Q969G9 470 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 TMEM159Q96B96 161 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 DHX58Q96C10 678 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 SERPINB11Q96P15 392 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 EPAS1Q99814 870 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 PRMT1Q99873 361 aaKnown RBP11.76□□□□□ -0.53
DDX39B-209ENST00000428450 FEM1AQ9BSK4 669 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 CPEB1Q9BZB8 566 aaKnown RBP11.76□□□□□ -0.53
DDX39B-209ENST00000428450 B3GNT4Q9C0J1 378 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 LRRN3Q9H3W5 708 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 GULP1Q9UBP9 304 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 HESX1Q9UBX0 185 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 SLC25A13Q9UJS0 675 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 NAALADL1Q9UQQ1 740 aa11.76□□□□□ -0.53
DDX39B-209ENST00000428450 O00370 1275 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 PDXKO00764 312 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 FPGTO14772 594 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 MAPK13O15264 365 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 SPTLC2O15270 562 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 AGFG2O95081 481 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 SETSIPP0DME0 302 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 SRCP12931 536 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 ITGB7P26010 798 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 UQCRFS1P47985 274 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 RGS7P49802 495 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 MAPK10P53779 464 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 ZNF787Q6DD87 383 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 KIAA1161Q6NSJ0 714 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 TMPRSS9Q7Z410 1059 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 CHSY1Q86X52 802 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 TICAM1Q8IUC6 712 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 KYQ8NBH2 561 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 CHST14Q8NCH0 376 aa11.75□□□□□ -0.53
DDX39B-209ENST00000428450 KIAA0895Q8NCT3 520 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms