RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 FRS2Q8WU20 508 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 ISG20Q96AZ6 181 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 OLFM3Q96PB7 478 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 POLMQ9NP87 494 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 C2orf42Q9NWW7 574 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 SNX12Q9UMY4 172 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 A0A1W2PQF6 199 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 TCRBV7S2A1N4TA0A589 114 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 H7C0C1 242 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 MCF2LO15068 1137 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 MATN3O15232 486 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 ZBTB24O43167 697 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 LAMTOR5O43504 91 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 BNIP3LO60238 219 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 SIN3BO75182 1162 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 VAV1P15498 845 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 TCP1P17987 556 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 COL9A1P20849 921 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 ATP5OP48047 213 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 DGKEP52429 567 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 RHOAP61586 193 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 OTUD4Q01804 1114 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 ZNF33AQ06730 810 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 PPIDQ08752 370 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 AP1B1Q10567 949 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 KLF1Q13351 362 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 CAMK2GQ13555 558 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 LBRQ14739 615 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 NOMO1Q15155 1222 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 CYTH1Q15438 398 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 KIAA1211LQ6NV74 962 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 Q6ZVU0 165 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 C1orf210Q8IVY1 113 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 BBS5Q8N3I7 341 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 TSTD1Q8NFU3 115 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 LRRN4Q8WUT4 740 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 TFB1MQ8WVM0 346 aaKnown RBP13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 MAIP1Q8WWC4 291 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 MAML1Q92585 1016 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 PTPRN2Q92932 1015 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 FATE1Q969F0 183 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 ERLEC1Q96DZ1 483 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 CCDC114Q96M63 670 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 OSBPL9Q96SU4 736 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 LGMNQ99538 433 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 CINPQ9BW66 212 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 TNKS2Q9H2K2 1166 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 PRSS16Q9NQE7 514 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 SEPT3Q9UH03 358 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 MUC3AQ02505 3323 aa13.09□□□□□ -0.31
CCHCR1-205ENST00000428174 TCRBV21S2A2A0A5A6 115 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 HACD1B0YJ81 288 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 ZNF821O75541 412 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 NEBLO76041 1014 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 ALDH1A2O94788 518 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 PAPSS2O95340 614 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 PEX11BO96011 259 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 FGGP02679 453 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 CASQ1P31415 396 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 RENBPP51606 427 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 EIF3EP60228 445 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 SNRPD1P62314 119 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 SLC10A7Q0GE19 358 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 XRCC4Q13426 336 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 HNRNPDQ14103 355 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 ZNF235Q14590 738 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 LONRF2Q1L5Z9 754 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 CARD16Q5EG05 197 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 C9orf64Q5T6V5 341 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 MARC1Q5VT66 337 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 PAPD7Q5XG87 772 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 SYT10Q6XYQ8 523 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 B4GALNT4Q76KP1 1039 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 ADAT2Q7Z6V5 191 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 ZC3H18Q86VM9 953 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 PLPP6Q8IY26 295 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 STK40Q8N2I9 435 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 RASGEF1CQ8N431 466 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 RYBPQ8N488 228 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 OR2T3Q8NH03 318 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 HHIPQ96QV1 700 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 FAM118BQ9BPY3 351 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 LRFN3Q9BTN0 628 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 TM6SF2Q9BZW4 377 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 FBRSQ9HAH7 460 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 LHX3Q9UBR4 397 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 TRIOO75962 3097 aa13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 NYNRINQ9P2P1 1898 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-205ENST00000428174 CUL9Q8IWT3 2517 aa13.07□□□□□ -0.32
CCHCR1-205ENST00000428174 CES2O00748 559 aa13.07□□□□□ -0.32
CCHCR1-205ENST00000428174 RNASEH1O60930 286 aaKnown RBP13.07□□□□□ -0.32
CCHCR1-205ENST00000428174 APBB3O95704 486 aa13.07□□□□□ -0.32
CCHCR1-205ENST00000428174 IGSF6O95976 241 aa13.07□□□□□ -0.32
CCHCR1-205ENST00000428174 GSRP00390 522 aa13.07□□□□□ -0.32
CCHCR1-205ENST00000428174 RBP3P10745 1247 aa13.07□□□□□ -0.32
CCHCR1-205ENST00000428174 CCNB1P14635 433 aa13.07□□□□□ -0.32
CCHCR1-205ENST00000428174 PRLRP16471 622 aa13.07□□□□□ -0.32
CCHCR1-205ENST00000428174 HSPA9P38646 679 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms