RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 TK2O00142 265 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 MYO1FO00160 1098 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 TOR1BO14657 336 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 DCLK1O15075 740 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 YKT6O15498 198 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 PLRG1O43660 514 aaKnown RBP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 MAGEC1O60732 1142 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 MFAP3LO75121 409 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 TMEM253P0C7T8 217 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 FAM228BP0C875 321 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 HLA-EP13747 358 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 EPHB2P29323 1055 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 SLC8A1P32418 973 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 ARHGAP25P42331 645 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 WASP42768 502 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 MAPK8P45983 427 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 RECQLP46063 649 aaPredicted RBP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 AFF3P51826 1226 aaKnown RBP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 ATXN1P54253 815 aaKnown RBP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 RACK1P63244 317 aaKnown RBP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 GFPT1Q06210 699 aaPredicted RBP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 NSUN2Q08J23 767 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 ZNF252P-AS1Q0IIN9 211 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 POLD3Q15054 466 aaPredicted RBP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 CDO1Q16878 200 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 AASDHQ4L235 1098 aaPredicted RBP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 TRIM61Q5EBN2 209 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 SH3PXD2AQ5TCZ1 1133 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 AFMIDQ63HM1 303 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 C22orf39Q6P5X5 142 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 DBX2Q6ZNG2 339 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 CYP4V2Q6ZWL3 525 aaPredicted RBP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 POLNQ7Z5Q5 900 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 RHOT2Q8IXI1 618 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 TMEFF1Q8IYR6 380 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 CCDC170Q8IYT3 715 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 CCDC185Q8N715 623 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 OR2A12Q8NGT7 310 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 RMDN1Q96DB5 314 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 HSPA12BQ96MM6 686 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 ZNF599Q96NL3 588 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 CPEB1Q9BZB8 566 aaKnown RBP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 LRRC19Q9H756 370 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 ZWILCHQ9H900 591 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 ATP13A1Q9HD20 1204 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 TMEM9BQ9NQ34 198 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 FBXL12Q9NXK8 326 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 MPP6Q9NZW5 540 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 DKK3Q9UBP4 350 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 AMACRQ9UHK6 382 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 AP4E1Q9UPM8 1137 aa9.33□□□□□ -0.92
SMC1A-203ENST00000428014 NYNRINQ9P2P1 1898 aaKnown RBP9.33□□□□□ -0.92
SMC1A-203ENST00000428014 ASCC3Q8N3C0 2202 aaKnown RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 A0A0D9SEW6 157 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 A0A1W2PPC4 97 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 A0A1W2PQ67 120 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 SMAPO00193 183 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 CDX4O14627 284 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 BCAT2O15382 392 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 SRGAP2O75044 1071 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 ZNF821O75541 412 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 GJB3O75712 270 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 LCA5LO95447 670 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 POP4O95707 220 aaKnown RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 CD160O95971 181 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 CEACAM1P13688 526 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 ITPKAP23677 461 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 ITGB7P26010 798 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 MIPP30301 263 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 CHRNA3P32297 505 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 SERPINB6P35237 376 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 DRD3P35462 400 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 HSPA9P38646 679 aaKnown RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 CTSOP43234 321 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 IRAK1P51617 712 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 GALCP54803 685 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 SNRPD1P62314 119 aaKnown RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 ARF5P84085 180 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 OGDHQ02218 1023 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 RAD51Q06609 339 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 SERINC3Q13530 473 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 TEAD4Q15561 434 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 LPAL2Q16609 132 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 HADHQ16836 314 aaKnown RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 RSPO4Q2I0M5 234 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 STPG1Q5TH74 334 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 LRRC38Q5VT99 294 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 KIAA0895LQ68EN5 471 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 ADGRD1Q6QNK2 874 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 CIR1Q86X95 450 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 RAVER1Q8IY67 606 aaKnown RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 OXR1Q8N573 874 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 ARFGAP1Q8N6T3 406 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 ATP11CQ8NB49 1132 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 OR2AP1Q8NGE2 309 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 CTNNBL1Q8WYA6 563 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 PIGKQ92643 395 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 RPL10LQ96L21 214 aaKnown RBP9.32□□□□□ -0.92
SMC1A-203ENST00000428014 TUBGCP5Q96RT8 1024 aa9.32□□□□□ -0.92
SMC1A-203ENST00000428014 OMDQ99983 421 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms