RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 SLITRK2Q9H156 845 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 ATAD3AQ9NVI7 634 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 ADAM28Q9UKQ2 775 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 PTCH2Q9Y6C5 1203 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 TMEM120BA0PK00 339 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 PIPSLA2A3N6 862 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 B2RBV5 119 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 CES2O00748 559 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 RPIAP49247 311 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 C11orf88Q6PI97 169 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 CASP12Q6UXS9 341 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 TC2NQ8N9U0 490 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 MTFMTQ96DP5 389 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 GPR20Q99678 358 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 VIPAS39Q9H9C1 493 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 MID1IP1Q9NPA3 183 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 RBM12Q9NTZ6 932 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 DNAJC11Q9NVH1 559 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 PCDHA11Q9Y5I1 949 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 F8VZ95 297 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 XPO1O14980 1071 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 AKAP3O75969 853 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 ANXA6P08133 673 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 PGAM1P18669 254 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 IDSP22304 550 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 PDX1P52945 283 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 E2F4Q16254 413 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 BHLHB9Q6PI77 547 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 SLC38A3Q99624 504 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 KCNN2Q9H2S1 579 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 BPIFA1Q9NP55 256 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 C3P01024 1663 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 KIF1AQ12756 1690 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 MCIDASD6RGH6 385 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 PRNPP04156 253 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 FLT3P36888 993 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 MFSD7Q6UXD7 560 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 ADPRHL2Q9NX46 363 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 HCN3Q9P1Z3 774 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 NR2E1Q9Y466 385 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 SALL3Q9BXA9 1300 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 CFAP73A6NFT4 308 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 CPA3P15088 417 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 GLRA2P23416 452 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 GCNT1Q02742 428 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 STX4Q12846 297 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 ABRQ12979 859 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 C1DQ13901 141 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 SPANXN3Q5MJ09 141 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 GALNT13Q8IUC8 556 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 ACTL9Q8TC94 416 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 TPD52L3Q96J77 140 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 OLFM3Q96PB7 478 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 TSPAN18Q96SJ8 248 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 EFCAB1Q9HAE3 211 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 PLK2Q9NYY3 685 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 BTBD7Q9P203 1132 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 PADI3Q9ULW8 664 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 TNPO3Q9Y5L0 923 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 FRMPD4Q14CM0 1322 aa10.07□□□□□ -0.8
CLTCL1-202ENST00000427926 ANKRD65E5RJM6 399 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 TFPIP10646 304 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 THRAP10827 490 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 TRAF2Q12933 501 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 SLC26A11Q86WA9 606 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 C17orf50Q8WW18 174 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 KLHL25Q9H0H3 589 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 PTPRHQ9HD43 1115 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 AGO1Q9UL18 857 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 SLC9A8Q9Y2E8 581 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 TRBV23OR9-2A0A075B6M9 112 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 WDR27A2RRH5 827 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 CDH3P22223 829 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 MGAT1P26572 445 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 ITPKBP27987 946 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 RTP1P59025 263 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 ELOAQ14241 798 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 GRTP1Q5TC63 336 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 BTN2A1Q7KYR7 527 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 OTOP3Q7RTS5 596 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 MCOLN2Q8IZK6 566 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 RNPEPQ9H4A4 650 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 AVENQ9NQS1 362 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 ZBTB22O15209 634 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 AOC2O75106 756 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 CCL5P13501 91 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 CTPS1P17812 591 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 PLA2G4EQ3MJ16 856 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 AFTPHQ6ULP2 937 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 LONP2Q86WA8 852 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 TMEM132CQ8N3T6 1108 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 SETD7Q8WTS6 366 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 THAP11Q96EK4 314 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 HSFY1Q96LI6 401 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 IRX2Q9BZI1 471 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 COL1A2P08123 1366 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 H3BN98 237 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 UBDO15205 165 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms