RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 MAN1C1Q9NR34 630 aa15.46■□□□□ 0.07
ACTB-204ENST00000425660 TNRC18O15417 2968 aaPredicted RBP15.46■□□□□ 0.07
ACTB-204ENST00000425660 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.45■□□□□ 0.06
ACTB-204ENST00000425660 TRAV19A0A0A6YYK7 116 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 NEBLO76041 1014 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 USP1O94782 785 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 CKMP06732 381 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 POLBP06746 335 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 LSP1P33241 339 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 CCR2P41597 374 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 SLC18A1P54219 525 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 ZNF177Q13360 481 aaPredicted RBP15.45■□□□□ 0.06
ACTB-204ENST00000425660 LBRQ14739 615 aaKnown RBP15.45■□□□□ 0.06
ACTB-204ENST00000425660 ARMC3Q5W041 872 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 ALG1LQ6GMV1 187 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 DENND5AQ6IQ26 1287 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 CXorf57Q6NSI4 855 aaKnown RBP15.45■□□□□ 0.06
ACTB-204ENST00000425660 SRRM1Q8IYB3 904 aaKnown RBP15.45■□□□□ 0.06
ACTB-204ENST00000425660 MRGPRX2Q96LB1 330 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 TGS1Q96RS0 853 aaKnown RBP15.45■□□□□ 0.06
ACTB-204ENST00000425660 TBL1YQ9BQ87 522 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 SLC46A2Q9BY10 475 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 ARNT2Q9HBZ2 717 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 SMYD2Q9NRG4 433 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 SAMD15Q9P1V8 674 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 ZNF510Q9Y2H8 683 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 FAM237BA0A1B0GVD1 139 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 TMEM120BA0PK00 339 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 SOBPA7XYQ1 873 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 GRXCR1A8MXD5 290 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 CXorf49A8MYA2 514 aaPredicted RBP15.45■□□□□ 0.06
ACTB-204ENST00000425660 FOXO6A8MYZ6 492 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 KDELR3O43731 214 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 CLASP2O75122 1294 aaKnown RBP15.45■□□□□ 0.06
ACTB-204ENST00000425660 RFPL2O75678 378 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 FAM155BO75949 473 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 INHBAP08476 426 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 POU2F2P09086 479 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 HNRNPA1P09651 372 aaKnown RBP eCLIP15.45■□□□□ 0.06
ACTB-204ENST00000425660 BRAFP15056 766 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 CHN1P15882 459 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 KRT15P19012 456 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 DDX6P26196 483 aaKnown RBP eCLIP15.45■□□□□ 0.063e-35■■□□□ 11.9
ACTB-204ENST00000425660 ETFBP38117 255 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 ERVK-21P61565 698 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 SPANXN3Q5MJ09 141 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 KDELC1Q6UW63 502 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 ZNF354CQ86Y25 554 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 PGBD5Q8N414 524 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 CPXM2Q8N436 756 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 LEMD2Q8NC56 503 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 ARRDC2Q8TBH0 407 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 MDM1Q8TC05 714 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 SELENOSQ9BQE4 189 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 ATP13A1Q9HD20 1204 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 SSU72Q9NP77 194 aaKnown RBP15.45■□□□□ 0.06
ACTB-204ENST00000425660 NT5MQ9NPB1 228 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 LSM7Q9UK45 103 aaKnown RBP15.45■□□□□ 0.06
ACTB-204ENST00000425660 ARHGAP26Q9UNA1 814 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 IKBKGQ9Y6K9 419 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 DENND4CQ5VZ89 1909 aa15.45■□□□□ 0.06
ACTB-204ENST00000425660 MTCL1Q9Y4B5 1905 aaKnown RBP15.44■□□□□ 0.06
ACTB-204ENST00000425660 IQANK1A0A1B0GTG1 560 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 CSPG5O95196 566 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 RHOCP08134 193 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 MMP2P08253 660 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 MYL4P12829 197 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 NIPAL4Q0D2K0 466 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 RFTN1Q14699 578 aaPredicted RBP15.44■□□□□ 0.06
ACTB-204ENST00000425660 SHHQ15465 462 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 MPP7Q5T2T1 576 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 CERCAMQ5T4B2 595 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 STXBP5Q5T5C0 1151 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 TTC19Q6DKK2 380 aaPredicted RBP15.44■□□□□ 0.06
ACTB-204ENST00000425660 CNPY4Q8N129 248 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 HJURPQ8NCD3 748 aaPredicted RBP15.44■□□□□ 0.06
ACTB-204ENST00000425660 IPMKQ8NFU5 416 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 OR7D4Q8NG98 312 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 SHKBP1Q8TBC3 707 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 ATXN2LQ8WWM7 1075 aaKnown RBP15.44■□□□□ 0.06
ACTB-204ENST00000425660 MRRFQ96E11 262 aaKnown RBP15.44■□□□□ 0.06
ACTB-204ENST00000425660 APOL2Q9BQE5 337 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 KIFC1Q9BW19 673 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 HCFC1R1Q9NWW0 138 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 DNMT3BQ9UBC3 853 aaKnown RBP15.44■□□□□ 0.06
ACTB-204ENST00000425660 RPS6KL1Q9Y6S9 549 aa15.44■□□□□ 0.06
ACTB-204ENST00000425660 ZCWPW2A0A1B0GU75 182 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 PRPF4O43172 522 aaKnown RBP eCLIP15.43■□□□□ 0.062e-11■■■□□ 17.4
ACTB-204ENST00000425660 TSPAN3O60637 253 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 MOSPD3O75425 235 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 EPCAMP16422 314 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 PTPN2P17706 415 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 NAB1Q13506 487 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 RNF43Q68DV7 783 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 IL31Q6EBC2 164 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 MARK2Q7KZI7 788 aaKnown RBP15.43■□□□□ 0.06
ACTB-204ENST00000425660 PPM1NQ8N819 430 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 PSKH2Q96QS6 385 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 FSD1LQ9BXM9 530 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 POLR1EQ9GZS1 481 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms