RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 PABPC3Q9H361 631 aaKnown RBP13.04□□□□□ -0.32
SGCE-203ENST00000425444 SGK2Q9HBY8 427 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
SGCE-203ENST00000425444 FBXL12Q9NXK8 326 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 SCML1Q9UN30 329 aa13.04□□□□□ -0.32
SGCE-203ENST00000425444 NBASA2RRP1 2371 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 A0A1W2PP55 124 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 ANKRD62A6NC57 917 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 FAM47DPA6NHR8 397 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 I6L893 689 aaPredicted RBP13.03□□□□□ -0.32
SGCE-203ENST00000425444 RNASEH2AO75792 299 aaKnown RBP13.03□□□□□ -0.32
SGCE-203ENST00000425444 FSBPO95073 299 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 ADH1BP00325 375 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 IL1BP01584 269 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 KRT3P12035 628 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 OR1E1P30953 314 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 PLK1P53350 603 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 KRT83P78385 493 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 IL9RQ01113 521 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 ELAVL3Q14576 367 aaKnown RBP13.03□□□□□ -0.32
SGCE-203ENST00000425444 ARID5BQ14865 1188 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 C5orf22Q49AR2 442 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 ALFQ53S48 1182 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 ARHGAP40Q5TG30 622 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 DNAJC24Q6P3W2 148 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 PRICKLE2Q7Z3G6 844 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 STK40Q8N2I9 435 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 OR52K2Q8NGK3 314 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 C1orf216Q8TAB5 229 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 NAF1Q96HR8 494 aaKnown RBP13.03□□□□□ -0.32
SGCE-203ENST00000425444 HAPLN3Q96S86 360 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 FEM1AQ9BSK4 669 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 C2orf49Q9BVC5 232 aaPredicted RBP13.03□□□□□ -0.32
SGCE-203ENST00000425444 PCED1AQ9H1Q7 454 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 C6orf106Q9H6K1 298 aaPredicted RBP13.03□□□□□ -0.32
SGCE-203ENST00000425444 MPP6Q9NZW5 540 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 ANKRD6Q9Y2G4 727 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 PCDHGA1Q9Y5H4 931 aa13.03□□□□□ -0.32
SGCE-203ENST00000425444 C2CD4BA6NLJ0 364 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 LRRC53A6NM62 1247 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 BNIP3LO60238 219 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 PCDHGA12O60330 932 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 KRT10P13645 584 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 DESP17661 470 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 GPD1P21695 349 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 SLC8A1P32418 973 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 PTPN9P43378 593 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 GSCP56915 257 aaPredicted RBP13.02□□□□□ -0.33
SGCE-203ENST00000425444 TMPRSS3P57727 454 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.33
SGCE-203ENST00000425444 TEAD4Q15561 434 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 ASIC2Q16515 512 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 CCDC14Q49A88 953 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 COLEC12Q5KU26 742 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 HES3Q5TGS1 186 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 BROXQ5VW32 411 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 USP30Q70CQ3 517 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 BNIPLQ7Z465 357 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 DSG4Q86SJ6 1040 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 PHF13Q86YI8 300 aaPredicted RBP13.02□□□□□ -0.33
SGCE-203ENST00000425444 C3orf20Q8ND61 904 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 FAM172AQ8WUF8 416 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 OR8D1Q8WZ84 308 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 PTPRN2Q92932 1015 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 C1orf74Q96LT6 269 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 MCEEQ96PE7 176 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 FUCA2Q9BTY2 467 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 ZYG11BQ9C0D3 744 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 CPNE5Q9HCH3 593 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 IL17BQ9UHF5 180 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 MYO6Q9UM54 1294 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D30Q9Y2I9 924 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.02□□□□□ -0.33
SGCE-203ENST00000425444 SLCO1B1Q9Y6L6 691 aa13.02□□□□□ -0.33
SGCE-203ENST00000425444 SPTBN1Q01082 2364 aaKnown RBP13.02□□□□□ -0.33
SGCE-203ENST00000425444 RELNP78509 3460 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 A0A1W2PQC6 194 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 DRGXA6NNA5 263 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 TMCO5BA8MYB1 307 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 H0Y8X5 98 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 GOLGA6L19H0YKK7 550 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 ENC1O14682 589 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 RFPL3O75679 317 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 ENDOD1O94919 500 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 C7P10643 843 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 CDK4P11802 303 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 VAV1P15498 845 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 TNFAIP3P21580 790 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 DNAJC3Q13217 504 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 IQCB1Q15051 598 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 DLG2Q15700 870 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D25Q3MII6 688 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 RWDD4Q6NW29 188 aaKnown RBP13.01□□□□□ -0.33
SGCE-203ENST00000425444 Q6ZVU0 165 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 MON1BQ7L1V2 547 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 STRADAQ7RTN6 431 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
SGCE-203ENST00000425444 DRC7Q8IY82 874 aa13.01□□□□□ -0.33
SGCE-203ENST00000425444 ZNF683Q8IZ20 524 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms