RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 PYGBP11216 843 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 SERPINB9P50453 376 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 SGSHP51688 502 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 IL9RQ01113 521 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 NAB1Q13506 487 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 FRG1Q14331 258 aaKnown RBP26.94■■□□□ 1.9
LDB1-202ENST00000425280 ADGRF1Q5T601 910 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 ZNF449Q6P9G9 518 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.94■■□□□ 1.9
LDB1-202ENST00000425280 SP7Q8TDD2 431 aaPredicted RBP26.94■■□□□ 1.9
LDB1-202ENST00000425280 IMP4Q96G21 291 aaKnown RBP26.94■■□□□ 1.9
LDB1-202ENST00000425280 MAGEB18Q96M61 343 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 CHRAC1Q9NRG0 131 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 ASB3Q9Y575 518 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 CHD5Q8TDI0 1954 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 LCHNA4D1U4 455 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 TCP11X1B4DZS4 312 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 PRAMEF11O60813 436 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 MAXP61244 160 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 MPP3Q13368 585 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 PABPC1LQ4VXU2 614 aaKnown RBP26.94■■□□□ 1.9
LDB1-202ENST00000425280 PSRC1Q6PGN9 363 aaPredicted RBP26.94■■□□□ 1.9
LDB1-202ENST00000425280 KDELC1Q6UW63 502 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 RASSF3Q86WH2 238 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 OR52K2Q8NGK3 314 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 MTBPQ96DY7 904 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 ENTPD7Q9NQZ7 604 aa26.94■■□□□ 1.9
LDB1-202ENST00000425280 A0A0D9SEW6 157 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 SMAD1Q15797 465 aaKnown RBP26.93■■□□□ 1.9
LDB1-202ENST00000425280 TXNDC8Q6A555 127 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 MFSD3Q96ES6 412 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 MAGEH1Q9H213 219 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 GRID1Q9ULK0 1009 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 EBAG9O00559 213 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 FOXN2P32314 431 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 GNA12Q03113 381 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 ITKQ08881 620 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 RANBP10Q6VN20 620 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 PACS1Q6VY07 963 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 PGBD5Q8N414 524 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 TCP10LQ8TDR4 215 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 APOPT1Q96IL0 206 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 KIFC1Q9BW19 673 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 FSD1LQ9BXM9 530 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 PDFQ9HBH1 243 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 PSAT1Q9Y617 370 aa26.93■■□□□ 1.9
LDB1-202ENST00000425280 CLDN11O75508 207 aa26.92■■□□□ 1.9
LDB1-202ENST00000425280 RFPL1O75677 317 aa26.92■■□□□ 1.9
LDB1-202ENST00000425280 ADH1AP07327 375 aa26.92■■□□□ 1.9
LDB1-202ENST00000425280 NUMBP49757 651 aa26.92■■□□□ 1.9
LDB1-202ENST00000425280 WNT3AP56704 352 aa26.92■■□□□ 1.9
LDB1-202ENST00000425280 ERVFC1P60507 584 aa26.92■■□□□ 1.9
LDB1-202ENST00000425280 SMAD3P84022 425 aaKnown RBP26.92■■□□□ 1.9
LDB1-202ENST00000425280 LBRQ14739 615 aaKnown RBP26.92■■□□□ 1.9
LDB1-202ENST00000425280 MROH9Q5TGP6 573 aa26.92■■□□□ 1.9
LDB1-202ENST00000425280 ARL14EPQ8N8R7 260 aaPredicted RBP26.92■■□□□ 1.9
LDB1-202ENST00000425280 TGS1Q96RS0 853 aaKnown RBP26.92■■□□□ 1.9
LDB1-202ENST00000425280 ALG13Q9NP73 1137 aaKnown RBP26.92■■□□□ 1.9
LDB1-202ENST00000425280 ZFATQ9P243 1243 aa26.92■■□□□ 1.9
LDB1-202ENST00000425280 SLC4A7Q9Y6M7 1214 aa26.92■■□□□ 1.9
LDB1-202ENST00000425280 TM9SF1O15321 606 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 TSPAN3O60637 253 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 OLFM2O95897 454 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 MMP2P08253 660 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 ETFBP38117 255 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 NEK3P51956 506 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 DSC2Q02487 901 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 LVRNQ6Q4G3 990 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 C7orf61Q8IZ16 206 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 OR7D4Q8NG98 312 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 HERVK_113Q902F9 699 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 TCF25Q9BQ70 676 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 C12orf65Q9H3J6 166 aaKnown RBP26.91■■□□□ 1.9
LDB1-202ENST00000425280 STOML2Q9UJZ1 356 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 TLL1O43897 1013 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 LPXNO60711 386 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 LRG1P02750 347 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 CNTFP26441 200 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 NMBRP28336 390 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 HOXD9P28356 352 aaPredicted RBP26.91■■□□□ 1.9
LDB1-202ENST00000425280 GABRR2P28476 465 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 CD86P42081 329 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 TMCO4Q5TGY1 634 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 HHATQ5VTY9 493 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 CCDC149Q6ZUS6 474 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 GAREM2Q75VX8 874 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 CHST9Q7L1S5 443 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 KDELC2Q7Z4H8 507 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 TMC8Q8IU68 726 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 HS6ST3Q8IZP7 471 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 ADAMTS19Q8TE59 1207 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 LRRC3Q9BY71 257 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 SLC17A7Q9P2U7 560 aa26.91■■□□□ 1.9
LDB1-202ENST00000425280 C8AP07357 584 aa26.9■■□□□ 1.9
LDB1-202ENST00000425280 BMPR1AP36894 532 aa26.9■■□□□ 1.9
LDB1-202ENST00000425280 IHHQ14623 411 aa26.9■■□□□ 1.9
LDB1-202ENST00000425280 PCSK7Q16549 785 aa26.9■■□□□ 1.9
LDB1-202ENST00000425280 PCID2Q5JVF3 399 aa26.9■■□□□ 1.9
LDB1-202ENST00000425280 CCDC117Q8IWD4 279 aaPredicted RBP26.9■■□□□ 1.9
LDB1-202ENST00000425280 KREMEN2Q8NCW0 462 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms