RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 PCDH20Q8N6Y1 951 aaKnown RBP22.34■■□□□ 1.17
HMGA2-205ENST00000425208 NELL1Q92832 810 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 IRF2BPLQ9H1B7 796 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 ZSCAN32Q9NX65 697 aa22.34■■□□□ 1.17
HMGA2-205ENST00000425208 DDX3YO15523 660 aaKnown RBP22.33■■□□□ 1.17
HMGA2-205ENST00000425208 BNIP3LO60238 219 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 CST8O60676 142 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 RNASEH1O60930 286 aaKnown RBP22.33■■□□□ 1.17
HMGA2-205ENST00000425208 TMCC1O94876 653 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 KRT10P13645 584 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 MX2P20592 715 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 RECQLP46063 649 aaPredicted RBP22.33■■□□□ 1.17
HMGA2-205ENST00000425208 DNA2P51530 1060 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 GALNT2Q10471 571 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 LLGL1Q15334 1064 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 WDR5BQ86VZ2 330 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 OR8D1Q8WZ84 308 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 ISG20Q96AZ6 181 aaKnown RBP22.33■■□□□ 1.17
HMGA2-205ENST00000425208 TPSD1Q9BZJ3 242 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 RSPH9Q9H1X1 276 aaPredicted RBP22.33■■□□□ 1.17
HMGA2-205ENST00000425208 TNKS2Q9H2K2 1166 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 TRMT1Q9NXH9 659 aaKnown RBP22.33■■□□□ 1.17
HMGA2-205ENST00000425208 DTLQ9NZJ0 730 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 PYCARDQ9ULZ3 195 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 FARP1Q9Y4F1 1045 aaPredicted RBP22.33■■□□□ 1.17
HMGA2-205ENST00000425208 PCDHGA2Q9Y5H1 932 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 HEY1Q9Y5J3 304 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 EML5Q05BV3 1969 aa22.33■■□□□ 1.17
HMGA2-205ENST00000425208 FANCMQ8IYD8 2048 aa22.33■■□□□ 1.16
HMGA2-205ENST00000425208 USP34Q70CQ2 3546 aa22.32■■□□□ 1.16
HMGA2-205ENST00000425208 MAP3K6O95382 1288 aa22.32■■□□□ 1.16
HMGA2-205ENST00000425208 PTPN7P35236 360 aa22.32■■□□□ 1.16
HMGA2-205ENST00000425208 GARSP41250 739 aaKnown RBP22.32■■□□□ 1.16
HMGA2-205ENST00000425208 KIAA1324Q6UXG2 1013 aaKnown RBP22.32■■□□□ 1.16
HMGA2-205ENST00000425208 CACUL1Q86Y37 369 aa22.32■■□□□ 1.16
HMGA2-205ENST00000425208 STK40Q8N2I9 435 aa22.32■■□□□ 1.16
HMGA2-205ENST00000425208 PRCCQ92733 491 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-205ENST00000425208 SIPA1Q96FS4 1042 aa22.32■■□□□ 1.16
HMGA2-205ENST00000425208 SLC6A17Q9H1V8 727 aa22.32■■□□□ 1.16
HMGA2-205ENST00000425208 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.32■■□□□ 1.16
HMGA2-205ENST00000425208 GOLGA6L9A6NEM1 432 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 ALOX15BO15296 676 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 MAFKO60675 156 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 ZNF821O75541 412 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-205ENST00000425208 TGM2P21980 687 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 RFTN1Q14699 578 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-205ENST00000425208 MEI1Q5TIA1 1274 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 ZNF776Q68DI1 518 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-205ENST00000425208 ZC3H14Q6PJT7 736 aaKnown RBP22.31■■□□□ 1.16
HMGA2-205ENST00000425208 DSG4Q86SJ6 1040 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 ZBTB44Q8NCP5 570 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 NSMCE1Q8WV22 266 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 ZNF599Q96NL3 588 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 OSBPL8Q9BZF1 889 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 TM6SF2Q9BZW4 377 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 EFR3BQ9Y2G0 817 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 MCF2LO15068 1137 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 PYGMP11217 842 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 ACADMP11310 421 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 NR2C2P49116 596 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 RHOAP61586 193 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 SNRPD1P62314 119 aaKnown RBP22.31■■□□□ 1.16
HMGA2-205ENST00000425208 ZBTB16Q05516 673 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 SLC10A2Q12908 348 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-205ENST00000425208 RPS6KA1Q15418 735 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 TMCO4Q5TGY1 634 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 TIGD7Q6NT04 549 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-205ENST00000425208 BZW1Q7L1Q6 419 aaKnown RBP22.31■■□□□ 1.16
HMGA2-205ENST00000425208 OR2A12Q8NGT7 310 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 HEMGNQ9BXL5 484 aa22.31■■□□□ 1.16
HMGA2-205ENST00000425208 ZNF217O75362 1048 aa22.3■■□□□ 1.16
HMGA2-205ENST00000425208 GSRP00390 522 aa22.3■■□□□ 1.16
HMGA2-205ENST00000425208 DNTTP04053 509 aa22.3■■□□□ 1.16
HMGA2-205ENST00000425208 RPS14P62263 151 aaKnown RBP22.3■■□□□ 1.16
HMGA2-205ENST00000425208 ADCY2Q08462 1091 aa22.3■■□□□ 1.16
HMGA2-205ENST00000425208 ZNF211Q13398 564 aaPredicted RBP22.3■■□□□ 1.16
HMGA2-205ENST00000425208 TTC31Q49AM3 519 aaPredicted RBP22.3■■□□□ 1.16
HMGA2-205ENST00000425208 USP39Q53GS9 565 aaKnown RBP22.3■■□□□ 1.16
HMGA2-205ENST00000425208 CARD16Q5EG05 197 aa22.3■■□□□ 1.16
HMGA2-205ENST00000425208 BBS12Q6ZW61 710 aa22.3■■□□□ 1.16
HMGA2-205ENST00000425208 MMAAQ8IVH4 418 aaKnown RBP22.3■■□□□ 1.16
HMGA2-205ENST00000425208 PLPP6Q8IY26 295 aa22.3■■□□□ 1.16
HMGA2-205ENST00000425208 OR2AP1Q8NGE2 309 aa22.3■■□□□ 1.16
HMGA2-205ENST00000425208 HDAC11Q96DB2 347 aa22.3■■□□□ 1.16
HMGA2-205ENST00000425208 GDAP1L1Q96MZ0 367 aa22.3■■□□□ 1.16
HMGA2-205ENST00000425208 FAM129BQ96TA1 746 aa22.3■■□□□ 1.16
HMGA2-205ENST00000425208 CINPQ9BW66 212 aaPredicted RBP22.3■■□□□ 1.16
HMGA2-205ENST00000425208 MYO15AQ9UKN7 3530 aa22.29■■□□□ 1.16
HMGA2-205ENST00000425208 PLXND1Q9Y4D7 1925 aa22.29■■□□□ 1.16
HMGA2-205ENST00000425208 PPP1R12AO14974 1030 aaPredicted RBP22.29■■□□□ 1.16
HMGA2-205ENST00000425208 KIF5CO60282 957 aa22.29■■□□□ 1.16
HMGA2-205ENST00000425208 IGSF6O95976 241 aa22.29■■□□□ 1.16
HMGA2-205ENST00000425208 ADH1BP00325 375 aa22.29■■□□□ 1.16
HMGA2-205ENST00000425208 IL1BP01584 269 aa22.29■■□□□ 1.16
HMGA2-205ENST00000425208 C7P10643 843 aa22.29■■□□□ 1.16
HMGA2-205ENST00000425208 MSNP26038 577 aaKnown RBP22.29■■□□□ 1.16
HMGA2-205ENST00000425208 CNR2P34972 360 aa22.29■■□□□ 1.16
HMGA2-205ENST00000425208 PSMD8P48556 350 aa22.29■■□□□ 1.16
HMGA2-205ENST00000425208 CCNHP51946 323 aaPredicted RBP22.29■■□□□ 1.16
HMGA2-205ENST00000425208 BYSLQ13895 437 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms