RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 Q6ZVU0 165 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 TMPRSS12Q86WS5 348 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 XYLT1Q86Y38 959 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 EID2Q8N6I1 236 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 PDCD7Q8N8D1 485 aaKnown RBP13.29□□□□□ -0.28
VRK3-203ENST00000424804 OR2A12Q8NGT7 310 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 VOPP1Q96AW1 172 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 ARRDC3Q96B67 414 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 CRELD1Q96HD1 420 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 CNDP2Q96KP4 475 aaKnown RBP13.29□□□□□ -0.28
VRK3-203ENST00000424804 TSPY26PQ9H489 355 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 SCUBE2Q9NQ36 999 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 GDF3Q9NR23 364 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 METTL5Q9NRN9 209 aaKnown RBP13.29□□□□□ -0.28
VRK3-203ENST00000424804 TPX2Q9ULW0 747 aaKnown RBP13.29□□□□□ -0.28
VRK3-203ENST00000424804 STAP1Q9ULZ2 295 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 HS3ST2Q9Y278 367 aa13.29□□□□□ -0.28
VRK3-203ENST00000424804 PTPRQQ9UMZ3 2332 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 IGLV3-10A0A075B6K4 115 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 A0A087WV48 116 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.28□□□□□ -0.28
VRK3-203ENST00000424804 A0A0D9SEW6 157 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 TMCO5BA8MYB1 307 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 GJB6O95452 261 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 CYP1A1P04798 512 aaPredicted RBP13.28□□□□□ -0.28
VRK3-203ENST00000424804 ITGAVP06756 1048 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 GIMD1P0DJR0 217 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 TNFAIP3P21580 790 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 MAT2AP31153 395 aaKnown RBP13.28□□□□□ -0.28
VRK3-203ENST00000424804 NNMTP40261 264 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 CDH4P55283 916 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 OXCT1P55809 520 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 DEUP1Q05D60 604 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 ZNF177Q13360 481 aaPredicted RBP13.28□□□□□ -0.28
VRK3-203ENST00000424804 NR1I3Q14994 352 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 POM121L1PQ3SYA9 428 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 IQCHQ86VS3 1027 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 SLC25A45Q8N413 288 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 EMC1Q8N766 993 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 TMEM145Q8NBT3 493 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 CHST14Q8NCH0 376 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 RNF214Q8ND24 703 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 OR8D1Q8WZ84 308 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 PCDHB18PQ96TA0 734 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 TBCBQ99426 244 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 AGPAT1Q99943 283 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 TKTL2Q9H0I9 626 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 SIK2Q9H0K1 926 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 IFNKQ9P0W0 207 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 VPS51Q9UID3 782 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 ZFR2Q9UPR6 939 aaKnown RBP13.28□□□□□ -0.28
VRK3-203ENST00000424804 TRPM6Q9BX84 2022 aa13.28□□□□□ -0.28
VRK3-203ENST00000424804 A0A1W2PQC6 194 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 E9PAM4 449 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 YKT6O15498 198 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 ZMPSTE24O75844 475 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 CD160O95971 181 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 C1SP09871 688 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 GLDCP23378 1020 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 FLT3P36888 993 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 ATP11AP98196 1134 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 CDO1Q16878 200 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 CLEC16AQ2KHT3 1053 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 ZNF284Q2VY69 593 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 PROX2Q3B8N5 592 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 ACCSLQ4AC99 568 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 RAB6CQ53S08 254 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 CCDC157Q569K6 752 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 PRPF39Q86UA1 669 aaKnown RBP13.27□□□□□ -0.29
VRK3-203ENST00000424804 CPLX3Q8WVH0 158 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 SKA1Q96BD8 255 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 C1orf74Q96LT6 269 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 RAB6CQ9H0N0 254 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 WDCPQ9H6R7 721 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 MPP6Q9NZW5 540 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 ADAM22Q9P0K1 906 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 SLC25A13Q9UJS0 675 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 TMEM59LQ9UK28 342 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 VPS28Q9UK41 221 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 DMTF1Q9Y222 760 aa13.27□□□□□ -0.29
VRK3-203ENST00000424804 TRIM38O00635 465 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 TLX3O43711 291 aaPredicted RBP13.26□□□□□ -0.29
VRK3-203ENST00000424804 RNGTTO60942 597 aaKnown RBP13.26□□□□□ -0.29
VRK3-203ENST00000424804 RFPL3O75679 317 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 MMP8P22894 467 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 RRM1P23921 792 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 CHRNA3P32297 505 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 NUDT1P36639 197 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 SCNN1AP37088 669 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 TARDBPQ13148 414 aaKnown RBP eCLIP13.26□□□□□ -0.29
VRK3-203ENST00000424804 INAVAQ3KP66 663 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 BRMS1LQ5PSV4 323 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 FAM46CQ5VWP2 391 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 TMIEQ8NEW7 156 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 BAP1Q92560 729 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 CFAP57Q96MR6 1250 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 SELENOOQ9BVL4 669 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 PREBQ9HCU5 417 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 RRN3Q9NYV6 651 aa13.26□□□□□ -0.29
VRK3-203ENST00000424804 WASF2Q9Y6W5 498 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms