RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 BEX3Q00994 111 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 DPTQ07507 201 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 PCLAFQ15004 111 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 ELAVL1Q15717 326 aaKnown RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 INSCQ1MX18 579 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 C15orf59Q2T9L4 293 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 BTBD16Q32M84 506 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 KCNT1Q5JUK3 1230 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 FNDC7Q5VTL7 733 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 CES4AQ5XG92 561 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 RAP1GAP2Q684P5 730 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 KRT40Q6A162 431 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 DGAT2L7PQ6IED9 249 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 HMBOX1Q6NT76 420 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 SLC25A24Q6NUK1 477 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 RINT1Q6NUQ1 792 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 Q6ZRM9 215 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 ADGRG6Q86SQ4 1221 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 CEP57Q86XR8 500 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 FAM90A1Q86YD7 464 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 SIX6OS1Q8N1H7 587 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 DCBLD1Q8N8Z6 715 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 ATAD1Q8NBU5 361 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 PLA2G15Q8NCC3 412 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 GPR156Q8NFN8 814 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 OR6C4Q8NGE1 309 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 IFI44Q8TCB0 444 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 NEK9Q8TD19 979 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 MRPS27Q92552 414 aaKnown RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 SPSB4Q96A44 273 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 SGF29Q96ES7 293 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 TMX3Q96JJ7 454 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 FAM81BQ96LP2 452 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 FIZ1Q96SL8 496 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 KCNK16Q96T55 309 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 SLC25A23Q9BV35 468 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 TINAGL1Q9GZM7 467 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 TAOK3Q9H2K8 898 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 INTS13Q9NVM9 706 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 BEX4Q9NWD9 120 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 SIDT1Q9NXL6 827 aaKnown RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 KCND2Q9NZV8 630 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 HMG20BQ9P0W2 317 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 NCDNQ9UBB6 729 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 ATP11BQ9Y2G3 1177 aa3.85□□□□□ -1.79
SF3B1-205ENST00000424674 NOSIPQ9Y314 301 aaKnown RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 REXO2Q9Y3B8 237 aaKnown RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 CHTOPQ9Y3Y2 248 aaKnown RBP3.85□□□□□ -1.79
SF3B1-205ENST00000424674 A0A0A6YYK5 440 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 GOLGA6L10A0A0M3HER8 536 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 UBE2QL1A1L167 161 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 FAM90A18PA6NE21 464 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 FAM90A16PA6NEW6 464 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 URADA6NGE7 173 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 FAM90A9PA6NNJ1 464 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 FAM90A5PA8MXJ8 464 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 GCOM1H8Y6P7 765 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ANGPT2O15123 496 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TNFSF14O43557 240 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TLR2O60603 784 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 PPP6R2O75170 966 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TOX4O94842 621 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 EPN2O95208 641 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SIX3O95343 332 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 MATN4O95460 622 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 STAMBPO95630 424 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 PEX11BO96011 259 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 AHSGP02765 367 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ALPPP05187 535 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TUBBP07437 444 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 GJB1P08034 283 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 INHBAP08476 426 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 HMOX1P09601 288 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 FAM90A15PP0C7V4 464 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 FAM90A14PP0C7W9 464 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 VSIG10L2P0DP72 767 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ALPPL2P10696 532 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 ERCC2P18074 760 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 MCM3P25205 808 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SLC15A1P46059 708 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SCNN1GP51170 649 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 BMXP51813 675 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 INHBCP55103 352 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 CASP9P55211 416 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 CDH8P55286 799 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 INHBEP58166 350 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TUBB4BP68371 445 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 MEF2AQ02078 507 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 PPATQ06203 517 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 EXOSC9Q06265 439 aaKnown RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 GABPB1Q06547 395 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SLC20A2Q08357 652 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 CCDC15Q0P6D6 951 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SP140Q13342 867 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 CTBP1Q13363 440 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SNTB1Q13884 538 aaKnown RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 TUBB2AQ13885 445 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 BAATQ14032 418 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-205ENST00000424674 SLC29A2Q14542 456 aa3.84□□□□□ -1.79
SF3B1-205ENST00000424674 IRF3Q14653 427 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms