RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 K7ERQ8 282 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 SLC30A4O14863 429 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 GDF9O60383 454 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 LRCH4O75427 683 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 FSBPO95073 299 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 PRNPP04156 253 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 SYPP08247 313 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 SERPINF2P08697 491 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 GLDCP23378 1020 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 CHRNA3P32297 505 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 ACVRL1P37023 503 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 ARL4AP40617 200 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 SSR1P43307 286 aaKnown RBP11.17□□□□□ -0.62
USP49-204ENST00000423567 LIMK1P53667 647 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 YBEYP58557 167 aaPredicted RBP11.17□□□□□ -0.62
USP49-204ENST00000423567 ZNF252P-AS1Q0IIN9 211 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 SEMA3BQ13214 749 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 PARP15Q460N3 678 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 ARTNQ5T4W7 220 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 STPG1Q5TH74 334 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 RYBPQ8N488 228 aaPredicted RBP11.17□□□□□ -0.62
USP49-204ENST00000423567 PCDH20Q8N6Y1 951 aaKnown RBP11.17□□□□□ -0.62
USP49-204ENST00000423567 PIP4K2CQ8TBX8 421 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 ZNF564Q8TBZ8 553 aaPredicted RBP11.17□□□□□ -0.62
USP49-204ENST00000423567 PPP1R16AQ96I34 528 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 SNRNP25Q9BV90 132 aaKnown RBP11.17□□□□□ -0.62
USP49-204ENST00000423567 ACE2Q9BYF1 805 aaPredicted RBP11.17□□□□□ -0.62
USP49-204ENST00000423567 NEUROG2Q9H2A3 272 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 C6orf106Q9H6K1 298 aaPredicted RBP11.17□□□□□ -0.62
USP49-204ENST00000423567 TMEM9BQ9NQ34 198 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 NDFIP2Q9NV92 336 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 DLL3Q9NYJ7 618 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 UVRAGQ9P2Y5 699 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 PPM1HQ9ULR3 514 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 TPX2Q9ULW0 747 aaKnown RBP11.17□□□□□ -0.62
USP49-204ENST00000423567 CKAP5Q14008 2032 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 SPAG17Q6Q759 2223 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 SDK1Q7Z5N4 2213 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 DMDP11532 3685 aa11.17□□□□□ -0.62
USP49-204ENST00000423567 A0A1B0GTW7 788 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 LNP1A1A4G5 178 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 WASH4PA8MWX3 477 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 RASA4BC9J798 803 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 H3BRJ5 948 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 KPNA3O00505 521 aaPredicted RBP11.16□□□□□ -0.62
USP49-204ENST00000423567 BCAT2O15382 392 aaPredicted RBP11.16□□□□□ -0.62
USP49-204ENST00000423567 SLC7A4O43246 635 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 RASA4O43374 803 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 SMAD6O43541 496 aaKnown RBP11.16□□□□□ -0.62
USP49-204ENST00000423567 BUB1O43683 1085 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 KDELR3O43731 214 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 ZMPSTE24O75844 475 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 MAOBP27338 520 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 IRX4P78413 519 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 ARF5P84085 180 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 CA9Q16790 459 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 HADHQ16836 314 aaKnown RBP11.16□□□□□ -0.62
USP49-204ENST00000423567 DAB2IPQ5VWQ8 1189 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.16□□□□□ -0.62
USP49-204ENST00000423567 RFX8Q6ZV50 586 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 DGLUCYQ7Z3D6 616 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 ABCA7Q8IZY2 2146 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 UMODL1-AS1Q8N2C9 162 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 ZCCHC9Q8N567 271 aaKnown RBP11.16□□□□□ -0.62
USP49-204ENST00000423567 ARFGAP1Q8N6T3 406 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 NIPA2Q8N8Q9 360 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 TMIEQ8NEW7 156 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 OR2A12Q8NGT7 310 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 OR2T34Q8NGX1 318 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 OR14C36Q8NHC7 312 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 CASKIN2Q8WXE0 1202 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 DNASE2BQ8WZ79 361 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 HSPH1Q92598 858 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 KCTD15Q96SI1 283 aaPredicted RBP11.16□□□□□ -0.62
USP49-204ENST00000423567 TNKS2Q9H2K2 1166 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 NHEJ1Q9H9Q4 299 aaPredicted RBP11.16□□□□□ -0.62
USP49-204ENST00000423567 IL36AQ9UHA7 158 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 EIF2B4Q9UI10 523 aaKnown RBP11.16□□□□□ -0.62
USP49-204ENST00000423567 NEU3Q9UQ49 428 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.16□□□□□ -0.62
USP49-204ENST00000423567 FCF1Q9Y324 198 aaKnown RBP11.16□□□□□ -0.62
USP49-204ENST00000423567 THADAQ6YHU6 1953 aa11.16□□□□□ -0.62
USP49-204ENST00000423567 PLXND1Q9Y4D7 1925 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TBC1D3DA0A087WVF3 549 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TBC1D3IA0A087WXS9 549 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TBC1D3EA0A087X179 549 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TBC1D3KA0A087X1G2 549 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TBC1D3FA6NER0 549 aaPredicted RBP11.15□□□□□ -0.62
USP49-204ENST00000423567 ARHGAP42A6NI28 874 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 C4orf47A7E2U8 309 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TBC1D3LB9A6J9 549 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TMEM253P0C7T8 217 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 TBC1D3HP0C7X1 549 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 ENGP17813 658 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 CD27P26842 260 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 MAPK8P45983 427 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 HCAR3P49019 387 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 NDST2P52849 883 aa11.15□□□□□ -0.62
USP49-204ENST00000423567 SNRPD1P62314 119 aaKnown RBP11.15□□□□□ -0.62
USP49-204ENST00000423567 RAD51Q06609 339 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms