RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 HS3ST3A1Q9Y663 406 aa17.25■□□□□ 0.35
UPF3AP3-201ENST00000420996 DOCK4Q8N1I0 1966 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 DRGXA6NNA5 263 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 A6NNZ2 444 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 RNF103O00237 685 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 SCAMP1O15126 338 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 DXOO77932 396 aaKnown RBP17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 DUSP3P51452 185 aaPredicted RBP17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 PCBP4P57723 403 aaKnown RBP17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 CLDN2P57739 230 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 TMEM259Q4ZIN3 620 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 ARSIQ5FYB1 569 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 OTUD1Q5VV17 481 aaPredicted RBP17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 LRRC31Q6UY01 552 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 GBP6Q6ZN66 633 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 Q6ZSR6 202 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 ZDHHC17Q8IUH5 632 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 ZNF683Q8IZ20 524 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 SLC22A18ASQ8N1D0 253 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 ZNF843Q8N446 348 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 CHST14Q8NCH0 376 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 C1orf131Q8NDD1 294 aaKnown RBP17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 HIC2Q96JB3 615 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 C1orf74Q96LT6 269 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 DUSP23Q9BVJ7 150 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 ANLNQ9NQW6 1124 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 EVA1BQ9NVM1 165 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 IL36AQ9UHA7 158 aa17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 HELZ2Q9BYK8 2649 aaKnown RBP17.24■□□□□ 0.35
UPF3AP3-201ENST00000420996 A0A0D9SEW6 157 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 USP12O75317 370 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 F9P00740 461 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 MPOP05164 745 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 KRT9P35527 623 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 RECQLP46063 649 aaPredicted RBP17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 LSSP48449 732 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 HNRNPKP61978 463 aaKnown RBP eCLIP17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 APBA1Q02410 837 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 PTPN20Q4JDL3 420 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 ACBD5Q5T8D3 534 aaPredicted RBP17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 SEL1L3Q68CR1 1132 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 C22orf39Q6P5X5 142 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 PCSK4Q6UW60 755 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 LINGO4Q6UY18 593 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 ZNF605Q86T29 641 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 NT5C3BQ969T7 300 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 PGAP3Q96FM1 320 aaPredicted RBP17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 PPP1R16AQ96I34 528 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 BMFQ96LC9 184 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 ABCG4Q9H172 646 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 SYNCQ9H7C4 482 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 CAAP1Q9H8G2 361 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 POLR1BQ9H9Y6 1135 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 GPR27Q9NS67 375 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 TMEM51Q9NW97 253 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 DNAJC28Q9NX36 388 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 PAXBP1Q9Y5B6 917 aa17.23■□□□□ 0.35
UPF3AP3-201ENST00000420996 LY6G6EA0A0G2JKS1 128 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 CAPN8A6NHC0 703 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 I6L893 689 aaPredicted RBP17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 K7ESM1 405 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 ERVH48-1M5A8F1 160 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 CSO75390 466 aaKnown RBP17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 LEFTY1O75610 366 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 MYF5P13349 255 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 PLA2G2AP14555 144 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 TFE3P19532 575 aaPredicted RBP17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 NEK3P51956 506 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 UCNP55089 124 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 ERVPABLB-1P60509 514 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 RPS21P63220 83 aaKnown RBP17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 GABREP78334 506 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 EXOC3L4Q17RC7 722 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 BROXQ5VW32 411 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 KIAA1161Q6NSJ0 714 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 DPY19L3Q6ZPD9 716 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 GRIN3AQ8TCU5 1115 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 NAF1Q96HR8 494 aaKnown RBP17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 FEM1CQ96JP0 617 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 SLC17A9Q9BYT1 436 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 TNKS2Q9H2K2 1166 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 MPP6Q9NZW5 540 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 STAP1Q9ULZ2 295 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 WASF2Q9Y6W5 498 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 U3KQA8 63 aa17.22■□□□□ 0.35
UPF3AP3-201ENST00000420996 IGLV3-10A0A075B6K4 115 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 GTPBP10A4D1E9 387 aaKnown RBP17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 POM121BA6NF01 834 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 LZTS3O60299 673 aaPredicted RBP17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 ZNF821O75541 412 aaPredicted RBP17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 PON1P27169 355 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 OR1E1P30953 314 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 CLCN1P35523 988 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 SULT1E1P49888 294 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 TMPRSS3P57727 454 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 RNASE9P60153 205 aaKnown RBP17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 CFHR1Q03591 330 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 DEUP1Q05D60 604 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 SLC20A2Q08357 652 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms