RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 CNTN5O94779 1100 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 AGTP01019 485 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 ALDH3A1P30838 453 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 KPNA2P52292 529 aaKnown RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 MAXP61244 160 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 SLC7A9P82251 487 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 SIX1Q15475 284 aaPredicted RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 TRADDQ15628 312 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 RNASEH2BQ5TBB1 312 aaKnown RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 ZNF783Q6ZMS7 281 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 OTOP3Q7RTS5 596 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 NAT16Q8N8M0 369 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 GDAP1Q8TB36 358 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 ARHGEF2Q92974 986 aaKnown RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 ATP6V1G3Q96LB4 118 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 SERPINB12Q96P63 405 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 KLF16Q9BXK1 252 aaPredicted RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 ZNF576Q9H609 170 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 ZNF334Q9HCZ1 680 aaPredicted RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 HCFC1R1Q9NWW0 138 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 MTMR10Q9NXD2 777 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 USP12O75317 370 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 ZDHHC11BP0C7U3 371 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 MYBL2P10244 700 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 TSHRP16473 764 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 PGAM1P18669 254 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 NR1D1P20393 614 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 MGAT1P26572 445 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 CCT5P48643 541 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 POLR2LP62875 67 aaKnown RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 LONRF1Q17RB8 773 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 ALFQ53S48 1182 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 TAF1BQ53T94 588 aaPredicted RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 ARMC12Q5T9G4 340 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 CRIPAKQ8N1N5 446 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.53□□□□□ -1.2
BDNF-209ENST00000420794 OR52K1Q8NGK4 314 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 OR2W6PQ8NHA6 318 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 PRCCQ92733 491 aaPredicted RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 SRPK1Q96SB4 655 aaKnown RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 FAM107BQ9H098 131 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 CCDC78A2IDD5 438 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.52□□□□□ -1.2
BDNF-209ENST00000420794 C5orf67F2Z3F1 127 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 OAS1P00973 400 aaKnown RBP7.52□□□□□ -1.2
BDNF-209ENST00000420794 IL4RP24394 825 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 SPRP35270 261 aaPredicted RBP7.52□□□□□ -1.2
BDNF-209ENST00000420794 PBX2P40425 430 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 SERPINH1P50454 418 aaKnown RBP7.52□□□□□ -1.2
BDNF-209ENST00000420794 ATP1A2P50993 1020 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 WNT3AP56704 352 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 CDK18Q07002 472 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 POU6F1Q14863 301 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 PDGFRLQ15198 375 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 TAZQ16635 292 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 SNX30Q5VWJ9 437 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 GRAMD4Q6IC98 578 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 CPLX4Q7Z7G2 160 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 DSG4Q86SJ6 1040 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 BBS7Q8IWZ6 715 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 SRRM1Q8IYB3 904 aaKnown RBP7.52□□□□□ -1.2
BDNF-209ENST00000420794 LPCAT1Q8NF37 534 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 FBF1Q8TES7 1133 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 IGSF8Q969P0 613 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 NECTIN4Q96NY8 510 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 TM6SF2Q9BZW4 377 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 SMG9Q9H0W8 520 aaKnown RBP7.52□□□□□ -1.2
BDNF-209ENST00000420794 ATP13A3Q9H7F0 1226 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 EIF2B3Q9NR50 452 aaKnown RBP7.52□□□□□ -1.2
BDNF-209ENST00000420794 INTS9Q9NV88 658 aaKnown RBP7.52□□□□□ -1.2
BDNF-209ENST00000420794 NINJ2Q9NZG7 142 aa7.52□□□□□ -1.2
BDNF-209ENST00000420794 MYO7AQ13402 2215 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 ALOX15BO15296 676 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 SYNCRIPO60506 623 aaKnown RBP7.52□□□□□ -1.21
BDNF-209ENST00000420794 AP2A1O95782 977 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 TPH1P17752 444 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 HLA-DPA1P20036 260 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 MAGOHP61326 146 aaKnown RBP7.52□□□□□ -1.21
BDNF-209ENST00000420794 NTHL1P78549 312 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 SFSWAPQ12872 951 aaKnown RBP7.52□□□□□ -1.21
BDNF-209ENST00000420794 SEMA5AQ13591 1074 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 FNDC3BQ53EP0 1204 aaKnown RBP7.52□□□□□ -1.21
BDNF-209ENST00000420794 PCID2Q5JVF3 399 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 LILRA6Q6PI73 481 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 RNF168Q8IYW5 571 aaPredicted RBP7.52□□□□□ -1.21
BDNF-209ENST00000420794 MGARPQ8TDB4 240 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 WFIKKN2Q8TEU8 576 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 SCG3Q8WXD2 468 aaKnown RBP7.52□□□□□ -1.21
BDNF-209ENST00000420794 SUSD6Q92537 303 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 SMARCD2Q92925 531 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 HERPUD2Q9BSE4 406 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 SLC46A2Q9BY10 475 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 RNF38Q9H0F5 515 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 RC3H2Q9HBD1 1191 aaKnown RBP7.52□□□□□ -1.21
BDNF-209ENST00000420794 LMCD1Q9NZU5 365 aa7.52□□□□□ -1.21
BDNF-209ENST00000420794 DNMT3BQ9UBC3 853 aaKnown RBP7.52□□□□□ -1.21
BDNF-209ENST00000420794 TDRD15B5MCY1 1934 aaKnown RBP7.52□□□□□ -1.21
BDNF-209ENST00000420794 VIMP08670 466 aaKnown RBP7.52□□□□□ -1.21
BDNF-209ENST00000420794 DGKGP49619 791 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms