RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 ALG6Q9Y672 507 aa13.62□□□□□ -0.23
TMEM248-203ENST00000418375 SPTBN2O15020 2390 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 BUB1O43683 1085 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 MT-CO1P00395 513 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 DNTTP04053 509 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 AMPD1P23109 780 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 SERPINB6P35237 376 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 P2RY2P41231 377 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 RECQLP46063 649 aaPredicted RBP13.61□□□□□ -0.23
TMEM248-203ENST00000418375 ARSEP51690 589 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 ZBTB16Q05516 673 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 SFSWAPQ12872 951 aaKnown RBP13.61□□□□□ -0.23
TMEM248-203ENST00000418375 SERINC3Q13530 473 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 DPYSL3Q14195 570 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 C22orf39Q6P5X5 142 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 CYP2U1Q7Z449 544 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 DSG4Q86SJ6 1040 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 DAAM2Q86T65 1068 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 CASKIN2Q8WXE0 1202 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 RLN3Q8WXF3 142 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 OR8D1Q8WZ84 308 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 TSC1Q92574 1164 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 PTPRN2Q92932 1015 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 CELF6Q96J87 481 aaKnown RBP13.61□□□□□ -0.23
TMEM248-203ENST00000418375 TSGA10Q9BZW7 698 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 LACRTQ9GZZ8 138 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 SLC6A17Q9H1V8 727 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 RSPH9Q9H1X1 276 aaPredicted RBP13.61□□□□□ -0.23
TMEM248-203ENST00000418375 KLHL11Q9NVR0 708 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 SCML1Q9UN30 329 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 DOCK4Q8N1I0 1966 aa13.61□□□□□ -0.23
TMEM248-203ENST00000418375 LRRD1A4D1F6 860 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 K7ERQ8 282 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 DFFAO00273 331 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 TM4SF5O14894 197 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 ALOX15BO15296 676 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 MAP3K13O43283 966 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 PSTPIP1O43586 416 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 BNIP3LO60238 219 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 KRT1P04264 644 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 CD48P09326 243 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 TNNT1P13805 278 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 KDELR1P24390 212 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 DHPSP49366 369 aaPredicted RBP13.6□□□□□ -0.23
TMEM248-203ENST00000418375 PAPOLAP51003 745 aaKnown RBP13.6□□□□□ -0.23
TMEM248-203ENST00000418375 RPS14P62263 151 aaKnown RBP13.6□□□□□ -0.23
TMEM248-203ENST00000418375 MMRN1Q13201 1228 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 MAP7D1Q3KQU3 841 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 TTC31Q49AM3 519 aaPredicted RBP13.6□□□□□ -0.23
TMEM248-203ENST00000418375 AFMIDQ63HM1 303 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 SLC36A4Q6YBV0 504 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 Q6ZVU0 165 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 VSIG1Q86XK7 387 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 STK40Q8N2I9 435 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 PCDH20Q8N6Y1 951 aaKnown RBP13.6□□□□□ -0.23
TMEM248-203ENST00000418375 NPWQ8N729 165 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 RAPGEF5Q92565 580 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 ISG20Q96AZ6 181 aaKnown RBP13.6□□□□□ -0.23
TMEM248-203ENST00000418375 EDEM2Q9BV94 578 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 SLC39A8Q9C0K1 460 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 KLC2Q9H0B6 622 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 ITM2CQ9NQX7 267 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 SALL4Q9UJQ4 1053 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.6□□□□□ -0.23
TMEM248-203ENST00000418375 HYOU1Q9Y4L1 999 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 ADGRG1Q9Y653 693 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 DUSP10Q9Y6W6 482 aa13.6□□□□□ -0.23
TMEM248-203ENST00000418375 MUC22E2RYF6 1773 aaPredicted RBP13.6□□□□□ -0.23
TMEM248-203ENST00000418375 MACROD2A1Z1Q3 448 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 ZNF487B1APH4 448 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 KHNYNO15037 678 aaKnown RBP13.59□□□□□ -0.23
TMEM248-203ENST00000418375 SMAD6O43541 496 aaKnown RBP13.59□□□□□ -0.23
TMEM248-203ENST00000418375 PTMAP06454 111 aaKnown RBP13.59□□□□□ -0.23
TMEM248-203ENST00000418375 C7P10643 843 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 VAV1P15498 845 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 IL4RP24394 825 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 OXTRP30559 389 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 GSE1Q14687 1217 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 CST6Q15828 149 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 INO80DQ53TQ3 878 aaPredicted RBP13.59□□□□□ -0.23
TMEM248-203ENST00000418375 ANKRD20A8PQ5CZ79 823 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 FAM46CQ5VWP2 391 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 LPCAT2Q7L5N7 544 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 CACUL1Q86Y37 369 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 MMAAQ8IVH4 418 aaKnown RBP13.59□□□□□ -0.23
TMEM248-203ENST00000418375 ARHGAP12Q8IWW6 846 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 KIAA1524Q8TCG1 905 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 FAF2Q96CS3 445 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 MAK16Q9BXY0 300 aaKnown RBP13.59□□□□□ -0.23
TMEM248-203ENST00000418375 SP110Q9HB58 689 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 USP36Q9P275 1121 aaKnown RBP13.59□□□□□ -0.23
TMEM248-203ENST00000418375 UBA2Q9UBT2 640 aaPredicted RBP13.59□□□□□ -0.23
TMEM248-203ENST00000418375 CYP8B1Q9UNU6 501 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 NCKAP1Q9Y2A7 1128 aa13.59□□□□□ -0.23
TMEM248-203ENST00000418375 FCF1Q9Y324 198 aaKnown RBP13.59□□□□□ -0.23
TMEM248-203ENST00000418375 RALGAPA1Q6GYQ0 2036 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 SPAG17Q6Q759 2223 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 IGHV1OR15-9A0A0B4J2B8 117 aa13.58□□□□□ -0.24
TMEM248-203ENST00000418375 C1QTNF3-AMACRE9PGA6 284 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms