RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 HERVK_113Q902F9 699 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 PABPC5Q96DU9 382 aaKnown RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 TRIM56Q9BRZ2 755 aaKnown RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 FAM107BQ9H098 131 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 IL21Q9HBE4 155 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 NSMCE4AQ9NXX6 385 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 TXNDC16Q9P2K2 825 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 AGO1Q9UL18 857 aaKnown RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 ZFP37Q9Y6Q3 630 aaPredicted RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 ANAPC1Q9H1A4 1944 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 ZCWPW2A0A1B0GU75 182 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.06■□□□□ 0.32
SSBP3-205ENST00000417664 ATP9BO43861 1147 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 LPXNO60711 386 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 C1RP00736 705 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 HSPA1AP0DMV8 641 aaKnown RBP17.06■□□□□ 0.32
SSBP3-205ENST00000417664 HSPA1BP0DMV9 641 aaKnown RBP17.06■□□□□ 0.32
SSBP3-205ENST00000417664 MBL2P11226 248 aaPredicted RBP17.06■□□□□ 0.32
SSBP3-205ENST00000417664 GP5P40197 560 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 CCNFP41002 786 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 GNA12Q03113 381 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 SLC10A7Q0GE19 358 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 OLIG2Q13516 323 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 RFTN1Q14699 578 aaPredicted RBP17.06■□□□□ 0.32
SSBP3-205ENST00000417664 LBRQ14739 615 aaKnown RBP17.06■□□□□ 0.32
SSBP3-205ENST00000417664 GRTP1Q5TC63 336 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 RFWD3Q6PCD5 774 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 ZNF783Q6ZMS7 281 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 MRPS31Q92665 395 aaKnown RBP17.06■□□□□ 0.32
SSBP3-205ENST00000417664 ZNF669Q96BR6 464 aaPredicted RBP17.06■□□□□ 0.32
SSBP3-205ENST00000417664 SERAC1Q96JX3 654 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 MTIF3Q9H2K0 278 aaKnown RBP17.06■□□□□ 0.32
SSBP3-205ENST00000417664 NT5MQ9NPB1 228 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 GKN1Q9NS71 199 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 SLC4A7Q9Y6M7 1214 aa17.06■□□□□ 0.32
SSBP3-205ENST00000417664 CHD5Q8TDI0 1954 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.05■□□□□ 0.32
SSBP3-205ENST00000417664 H3BNC9 293 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 BMPR1AP36894 532 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 ZNF177Q13360 481 aaPredicted RBP17.05■□□□□ 0.32
SSBP3-205ENST00000417664 SLC14A2Q15849 920 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 PDK4Q16654 411 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 PDPK2PQ6A1A2 396 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 DENND5AQ6IQ26 1287 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 PKN3Q6P5Z2 889 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 KDELC1Q6UW63 502 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 PACS1Q6VY07 963 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 RASSF3Q86WH2 238 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 CIR1Q86X95 450 aaPredicted RBP17.05■□□□□ 0.32
SSBP3-205ENST00000417664 LRRC34Q8IZ02 419 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 CACNA2D3Q8IZS8 1091 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 GDAP1Q8TB36 358 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 TADA1Q96BN2 335 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 GRAMD1AQ96CP6 724 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 MYEOVQ96EZ4 313 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 MRGPRX2Q96LB1 330 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 FCRL3Q96P31 734 aaPredicted RBP17.05■□□□□ 0.32
SSBP3-205ENST00000417664 KLHL5Q96PQ7 755 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 TGS1Q96RS0 853 aaKnown RBP17.05■□□□□ 0.32
SSBP3-205ENST00000417664 APOL2Q9BQE5 337 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 FICDQ9BVA6 458 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 PRKD2Q9BZL6 878 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 POLR1EQ9GZS1 481 aaKnown RBP17.05■□□□□ 0.32
SSBP3-205ENST00000417664 VPS11Q9H270 941 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 ZNF334Q9HCZ1 680 aaPredicted RBP17.05■□□□□ 0.32
SSBP3-205ENST00000417664 TBC1D30Q9Y2I9 924 aa17.05■□□□□ 0.32
SSBP3-205ENST00000417664 TCP11X1B4DZS4 312 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 COPEO14579 308 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 PYGBP11216 843 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 HDCP19113 662 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 CDC25CP30307 473 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 CA8P35219 290 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 NEK3P51956 506 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 WNT3AP56704 352 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 SMAD3P84022 425 aaKnown RBP17.04■□□□□ 0.32
SSBP3-205ENST00000417664 UBE3AQ05086 875 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 ALG1LQ6GMV1 187 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 FOXR1Q6PIV2 292 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 LVRNQ6Q4G3 990 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 PIGWQ7Z7B1 504 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 CFAP52Q8N1V2 620 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 PPHLN1Q8NEY8 458 aaKnown RBP17.04■□□□□ 0.32
SSBP3-205ENST00000417664 TCP10LQ8TDR4 215 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 ZFRQ96KR1 1074 aaKnown RBP17.04■□□□□ 0.32
SSBP3-205ENST00000417664 PRICKLE1Q96MT3 831 aaPredicted RBP17.04■□□□□ 0.32
SSBP3-205ENST00000417664 IQCGQ9H095 443 aaKnown RBP17.04■□□□□ 0.32
SSBP3-205ENST00000417664 PDFQ9HBH1 243 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 ATP13A1Q9HD20 1204 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 MLXIPLQ9NP71 852 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 CXXC1Q9P0U4 656 aaPredicted RBP17.04■□□□□ 0.32
SSBP3-205ENST00000417664 PRKAG3Q9UGI9 489 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 ZNF510Q9Y2H8 683 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 ATXN2Q99700 1313 aaKnown RBP17.04■□□□□ 0.32
SSBP3-205ENST00000417664 TYW5A2RUC4 315 aaKnown RBP17.04■□□□□ 0.32
SSBP3-205ENST00000417664 KDELR3O43731 214 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 TLL1O43897 1013 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 UGT1A9O60656 530 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 PMPCBO75439 489 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 RFPL1O75677 317 aa17.04■□□□□ 0.32
SSBP3-205ENST00000417664 C8AP07357 584 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms