RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 RALGAPA1Q6GYQ0 2036 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 CNOT1A5YKK6 2376 aaKnown RBP16.73■□□□□ 0.27
DDR1-231ENST00000417521 TMEM191CA6NGB0 347 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 SMAD6O43541 496 aaKnown RBP16.73■□□□□ 0.27
DDR1-231ENST00000417521 BNIP3LO60238 219 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 GJB3O75712 270 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 GLDCP23378 1020 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 NOVA1P51513 510 aaKnown RBP16.73■□□□□ 0.27
DDR1-231ENST00000417521 CCR5P51681 352 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 OGDHQ02218 1023 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 IL27RAQ6UWB1 636 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 LINGO4Q6UY18 593 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.73■□□□□ 0.27
DDR1-231ENST00000417521 CCDC170Q8IYT3 715 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 TMIEQ8NEW7 156 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 OR14C36Q8NHC7 312 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 PIP4K2CQ8TBX8 421 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 FNIP1Q8TF40 1166 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 TRIM11Q96F44 468 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 ORAI3Q9BRQ5 295 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 CEP44Q9C0F1 390 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 TM9SF3Q9HD45 589 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 MYO1AQ9UBC5 1043 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 CNOT8Q9UFF9 292 aaKnown RBP16.73■□□□□ 0.27
DDR1-231ENST00000417521 DNAI1Q9UI46 699 aa16.73■□□□□ 0.27
DDR1-231ENST00000417521 ZFHX4Q86UP3 3567 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 A0A1W2PPC4 97 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 RAMP2O60895 175 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 MYBL1P10243 752 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 KCNA4P22459 653 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 PSMA2P25787 234 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 EPHB2P29323 1055 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 CHRNA3P32297 505 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 GRIA4P48058 902 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 CSNK1EP49674 416 aaKnown RBP16.72■□□□□ 0.27
DDR1-231ENST00000417521 SERPINH1P50454 418 aaKnown RBP16.72■□□□□ 0.27
DDR1-231ENST00000417521 ADPRHP54922 357 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 RACK1P63244 317 aaKnown RBP16.72■□□□□ 0.27
DDR1-231ENST00000417521 ARF5P84085 180 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 TEAD4Q15561 434 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 N4BP2L1Q5TBK1 243 aaPredicted RBP16.72■□□□□ 0.27
DDR1-231ENST00000417521 PSAPL1Q6NUJ1 521 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 C22orf39Q6P5X5 142 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 PIP4P1Q86T03 277 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 PYROXD2Q8N2H3 581 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 PCDH20Q8N6Y1 951 aaKnown RBP16.72■□□□□ 0.27
DDR1-231ENST00000417521 ARHGEF2Q92974 986 aaKnown RBP16.72■□□□□ 0.27
DDR1-231ENST00000417521 PDLIM2Q96JY6 352 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 EPAS1Q99814 870 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 SLC32A1Q9H598 525 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 SLCO1B1Q9Y6L6 691 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 SCINQ9Y6U3 715 aa16.72■□□□□ 0.27
DDR1-231ENST00000417521 KMT2BQ9UMN6 2715 aaPredicted RBP16.72■□□□□ 0.27
DDR1-231ENST00000417521 TBC1D3DA0A087WVF3 549 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 TBC1D3IA0A087WXS9 549 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 TBC1D3EA0A087X179 549 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 TBC1D3KA0A087X1G2 549 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 TBC1D3FA6NER0 549 aaPredicted RBP16.71■□□□□ 0.27
DDR1-231ENST00000417521 TBC1D3LB9A6J9 549 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 ZNF821O75541 412 aaPredicted RBP16.71■□□□□ 0.27
DDR1-231ENST00000417521 LCA5LO95447 670 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 PRNPP04156 253 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 TBC1D3HP0C7X1 549 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 HTR7P34969 479 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 CYLC1P35663 651 aaPredicted RBP16.71■□□□□ 0.27
DDR1-231ENST00000417521 ACVRL1P37023 503 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 RECQLP46063 649 aaPredicted RBP16.71■□□□□ 0.27
DDR1-231ENST00000417521 METAP1P53582 386 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 GEMIN4P57678 1058 aaKnown RBP16.71■□□□□ 0.27
DDR1-231ENST00000417521 BNC1Q01954 994 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 CCDC15Q0P6D6 951 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 TBC1D3GQ6DHY5 549 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 TBC1D3CQ6IPX1 549 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 PLPP6Q8IY26 295 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 TBC1D3Q8IZP1 549 aaPredicted RBP16.71■□□□□ 0.27
DDR1-231ENST00000417521 RTL3Q8N8U3 475 aaKnown RBP16.71■□□□□ 0.27
DDR1-231ENST00000417521 OR2I1PQ8NGU4 316 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 ISG20Q96AZ6 181 aaKnown RBP16.71■□□□□ 0.27
DDR1-231ENST00000417521 ARHGEF26Q96DR7 871 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 MRPL47Q9HD33 250 aaKnown RBP16.71■□□□□ 0.27
DDR1-231ENST00000417521 HPCAL4Q9UM19 191 aa16.71■□□□□ 0.27
DDR1-231ENST00000417521 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
DDR1-231ENST00000417521 EPG5Q9HCE0 2579 aa16.71■□□□□ 0.26
DDR1-231ENST00000417521 NUP205Q92621 2012 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 A0A1B0GVT2 93 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 WASH4PA8MWX3 477 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 EIF3CLB5ME19 914 aaKnown RBP16.7■□□□□ 0.26
DDR1-231ENST00000417521 PLRG1O43660 514 aaKnown RBP16.7■□□□□ 0.26
DDR1-231ENST00000417521 CREB3O43889 395 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 RNF8O76064 485 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 NDUFA10O95299 355 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 CER1O95813 267 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 CD160O95971 181 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 CTSLP07711 333 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 H2AFZP0C0S5 128 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 CD59P13987 128 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 CNTN1Q12860 1018 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 POLD3Q15054 466 aaPredicted RBP16.7■□□□□ 0.26
DDR1-231ENST00000417521 DPY19L3Q6ZPD9 716 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms