RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 GLP2RO95838 553 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 ABHD2P08910 425 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 GCAP28676 217 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 MMP13P45452 471 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 RENBPP51606 427 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 CDK16Q00536 496 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 DSC2Q02487 901 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 ITKQ08881 620 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 NIPAL4Q0D2K0 466 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 LBRQ14739 615 aaKnown RBP17.28■□□□□ 0.36
CALD1-204ENST00000417172 TDHQ8IZJ6 230 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 IPMKQ8NFU5 416 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 FBF1Q8TES7 1133 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 ATP6V1G3Q96LB4 118 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 FCRL5Q96RD9 977 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 FRMD8Q9BZ67 464 aaPredicted RBP17.28■□□□□ 0.36
CALD1-204ENST00000417172 ATP13A1Q9HD20 1204 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 SYBUQ9NX95 663 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 ZC3H7BQ9UGR2 993 aaKnown RBP17.28■□□□□ 0.36
CALD1-204ENST00000417172 ANKRD36A6QL64 1941 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 ILVBLA1L0T0 632 aa17.27■□□□□ 0.36
CALD1-204ENST00000417172 CBX4O00257 560 aa17.27■□□□□ 0.36
CALD1-204ENST00000417172 PMPCBO75439 489 aa17.27■□□□□ 0.36
CALD1-204ENST00000417172 SUN1O94901 812 aa17.27■□□□□ 0.36
CALD1-204ENST00000417172 LUC7L3O95232 432 aaKnown RBP17.27■□□□□ 0.36
CALD1-204ENST00000417172 CPP00450 1065 aa17.27■□□□□ 0.36
CALD1-204ENST00000417172 AGTP01019 485 aa17.27■□□□□ 0.36
CALD1-204ENST00000417172 DDX6P26196 483 aaKnown RBP eCLIP17.27■□□□□ 0.36
CALD1-204ENST00000417172 SMAD1Q15797 465 aaKnown RBP17.27■□□□□ 0.36
CALD1-204ENST00000417172 RARS2Q5T160 578 aaKnown RBP17.27■□□□□ 0.36
CALD1-204ENST00000417172 TTC39BQ5VTQ0 682 aaPredicted RBP17.27■□□□□ 0.36
CALD1-204ENST00000417172 LINGO4Q6UY18 593 aa17.27■□□□□ 0.36
CALD1-204ENST00000417172 SETD3Q86TU7 594 aaPredicted RBP17.27■□□□□ 0.36
CALD1-204ENST00000417172 TEX26Q8N6G2 289 aa17.27■□□□□ 0.36
CALD1-204ENST00000417172 LMAN2LQ9H0V9 348 aa17.27■□□□□ 0.36
CALD1-204ENST00000417172 RABGEF1Q9UJ41 708 aa17.27■□□□□ 0.36
CALD1-204ENST00000417172 GOLGA6CA6NDK9 693 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 POC1B-GALNT4F8VUJ3 575 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 MMP2P08253 660 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 GOLGA6DP0CG33 693 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 TPH1P17752 444 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 PFKLP17858 780 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 CSKP41240 450 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 OXCT1P55809 520 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 SARNPP82979 210 aaKnown RBP17.27■□□□□ 0.35
CALD1-204ENST00000417172 CDH18Q13634 790 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 PCSK7Q16549 785 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 CASC4Q6P4E1 433 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 UNC5AQ6ZN44 842 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 PRPF39Q86UA1 669 aaKnown RBP17.27■□□□□ 0.35
CALD1-204ENST00000417172 ARID3BQ8IVW6 561 aaPredicted RBP17.27■□□□□ 0.35
CALD1-204ENST00000417172 MFN1Q8IWA4 741 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 LEMD2Q8NC56 503 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 FATE1Q969F0 183 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 XPO6Q96QU8 1125 aaKnown RBP17.27■□□□□ 0.35
CALD1-204ENST00000417172 LINC00597Q9H2U6 94 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 GOLGA6AQ9NYA3 693 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 TBK1Q9UHD2 729 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 DPP7Q9UHL4 492 aa17.27■□□□□ 0.35
CALD1-204ENST00000417172 NOVA2Q9UNW9 492 aaKnown RBP17.27■□□□□ 0.35
CALD1-204ENST00000417172 EXOC1LA0A1B0GW35 172 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 TCRBV9S1A1TA0A576 114 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 KDELR3O43731 214 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 CD86P42081 329 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 ARF5P84085 180 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 PRPSAP1Q14558 356 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 ZNF77Q15935 545 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 CERCAMQ5T4B2 595 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 TMCO4Q5TGY1 634 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 CES3Q6UWW8 571 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 RNF135Q8IUD6 432 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 UNC5BQ8IZJ1 945 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 CYP4X1Q8N118 509 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 CPXM2Q8N436 756 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 DNAAF3Q8N9W5 541 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 MRPL38Q96DV4 380 aaKnown RBP17.26■□□□□ 0.35
CALD1-204ENST00000417172 EXOC2Q96KP1 924 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 LRRC3BQ96PB8 259 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 EBNA1BP2Q99848 306 aaKnown RBP17.26■□□□□ 0.35
CALD1-204ENST00000417172 FICDQ9BVA6 458 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 TMEM109Q9BVC6 243 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 ACE2Q9BYF1 805 aaPredicted RBP17.26■□□□□ 0.35
CALD1-204ENST00000417172 SFXN1Q9H9B4 322 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 CASS4Q9NQ75 786 aa17.26■□□□□ 0.35
CALD1-204ENST00000417172 E2F8A0AVK6 867 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 TYW5A2RUC4 315 aaKnown RBP17.25■□□□□ 0.35
CALD1-204ENST00000417172 MLNP12872 115 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 CHRNA4P43681 627 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 RGRP47804 291 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 HYAL1Q12794 435 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 CBLBQ13191 982 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 TCEAL5Q5H9L2 206 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 TRMT10BQ6PF06 316 aaKnown RBP17.25■□□□□ 0.35
CALD1-204ENST00000417172 TMEM25Q86YD3 366 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 KLHDC8BQ8IXV7 354 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 APCDD1Q8J025 514 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 NSMCE1Q8WV22 266 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 RSPRY1Q96DX4 576 aa17.25■□□□□ 0.35
CALD1-204ENST00000417172 IMP4Q96G21 291 aaKnown RBP17.25■□□□□ 0.35
CALD1-204ENST00000417172 MRGPRX2Q96LB1 330 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms